RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
SNHG6-203ENST00000520944 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
SNHG6-203ENST00000520944 C10orf95Q9H7T3 257 aa7.25□□□□□ -1.25
SNHG6-203ENST00000520944 KRTAP4-11Q9BYQ6 195 aa7.21□□□□□ -1.26
SNHG6-203ENST00000520944 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
SNHG6-203ENST00000520944 HMCN1Q96RW7 5635 aa7.19□□□□□ -1.26
SNHG6-203ENST00000520944 CCDC179H3BU77 68 aa7.17□□□□□ -1.26
SNHG6-203ENST00000520944 ATP5EP56381 51 aaPredicted RBP7.17□□□□□ -1.26
SNHG6-203ENST00000520944 MT4P47944 62 aa7.14□□□□□ -1.27
SNHG6-203ENST00000520944 KRTAP4-3Q9BYR4 195 aa7.1□□□□□ -1.27
SNHG6-203ENST00000520944 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
SNHG6-203ENST00000520944 KRTAP5-3Q6L8H2 238 aa7.05□□□□□ -1.28
SNHG6-203ENST00000520944 UQCR11O14957 56 aa7□□□□□ -1.29
SNHG6-203ENST00000520944 KRTAP12-3P60328 96 aa7□□□□□ -1.29
SNHG6-203ENST00000520944 KRTAP5-4Q6L8H1 288 aa7□□□□□ -1.29
SNHG6-203ENST00000520944 AHNAK2Q8IVF2 5795 aa6.95□□□□□ -1.3
SNHG6-203ENST00000520944 TMEM258P61165 79 aa6.91□□□□□ -1.3
SNHG6-203ENST00000520944 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
SNHG6-203ENST00000520944 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
SNHG6-203ENST00000520944 K7ERS5 55 aa6.78□□□□□ -1.32
SNHG6-203ENST00000520944 KRTAP5-10Q6L8G5 202 aa6.74□□□□□ -1.33
SNHG6-203ENST00000520944 KRTAP5-5Q701N2 237 aaPredicted RBP6.66□□□□□ -1.34
SNHG6-203ENST00000520944 KRTAP20-2Q3LI61 65 aa6.63□□□□□ -1.35
SNHG6-203ENST00000520944 V9GYY9 64 aa6.63□□□□□ -1.35
SNHG6-203ENST00000520944 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
SNHG6-203ENST00000520944 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
SNHG6-203ENST00000520944 SPRR5A0A1B0GTR4 108 aa6.6□□□□□ -1.35
SNHG6-203ENST00000520944 PSPHP1O15172 72 aa6.6□□□□□ -1.35
SNHG6-203ENST00000520944 KRTAP23-1A1A580 65 aa6.55□□□□□ -1.36
SNHG6-203ENST00000520944 Q1T7F1 81 aa6.52□□□□□ -1.37
SNHG6-203ENST00000520944 KRTAP5-7Q6L8G8 165 aa6.51□□□□□ -1.37
SNHG6-203ENST00000520944 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
SNHG6-203ENST00000520944 H3BS24 57 aa6.49□□□□□ -1.37
SNHG6-203ENST00000520944 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
SNHG6-203ENST00000520944 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
SNHG6-203ENST00000520944 A6NED7 52 aa6.39□□□□□ -1.39
SNHG6-203ENST00000520944 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
SNHG6-203ENST00000520944 ROMO1P60602 79 aa6.23□□□□□ -1.41
SNHG6-203ENST00000520944 RPS28P62857 69 aaKnown RBP6.23□□□□□ -1.41
SNHG6-203ENST00000520944 MT1AP04731 61 aa6.2□□□□□ -1.42
SNHG6-203ENST00000520944 KRTAP6-1Q3LI64 71 aa6.16□□□□□ -1.42
SNHG6-203ENST00000520944 KRTAP5-2Q701N4 177 aa6.1□□□□□ -1.43
SNHG6-203ENST00000520944 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
SNHG6-203ENST00000520944 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
SNHG6-203ENST00000520944 KRTAP5-8O75690 187 aa5.87□□□□□ -1.47
SNHG6-203ENST00000520944 OBSCNQ5VST9 7968 aa5.87□□□□□ -1.47
SNHG6-203ENST00000520944 MUC5BQ9HC84 5762 aaPredicted RBP5.77□□□□□ -1.49
SNHG6-203ENST00000520944 AHNAKQ09666 5890 aaKnown RBP5.76□□□□□ -1.49
SNHG6-203ENST00000520944 PCP4P48539 62 aa5.75□□□□□ -1.49
SNHG6-203ENST00000520944 MT3P25713 68 aa5.71□□□□□ -1.5
SNHG6-203ENST00000520944 MUC5ACP98088 5654 aa5.71□□□□□ -1.5
SNHG6-203ENST00000520944 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
SNHG6-203ENST00000520944 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
SNHG6-203ENST00000520944 LCE1EQ5T753 118 aa5.26□□□□□ -1.57
SNHG6-203ENST00000520944 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.16□□□□□ -1.58
SNHG6-203ENST00000520944 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
SNHG6-203ENST00000520944 PMAIP1Q13794 54 aa4.98□□□□□ -1.61
SNHG6-203ENST00000520944 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
SNHG6-203ENST00000520944 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
SNHG6-203ENST00000520944 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
SNHG6-203ENST00000520944 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
SNHG6-203ENST00000520944 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
SNHG6-203ENST00000520944 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
SNHG6-203ENST00000520944 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
SNHG6-203ENST00000520944 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
SNHG6-203ENST00000520944 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
SNHG6-203ENST00000520944 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
SNHG6-203ENST00000520944 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
SNHG6-203ENST00000520944 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
SNHG6-203ENST00000520944 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
SNHG6-203ENST00000520944 PHGR1C9JFL3 82 aa3.96□□□□□ -1.78
SNHG6-203ENST00000520944 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
SNHG6-203ENST00000520944 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
SNHG6-203ENST00000520944 PRM1P04553 51 aa3.16□□□□□ -1.9
SNHG6-203ENST00000520944 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
SNHG6-203ENST00000520944 INE1O15225 51 aa2.53□□□□□ -2
SNHG6-203ENST00000520944 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms