RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
TNPO1-212ENST00000520850 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
TNPO1-212ENST00000520850 TNP1P09430 55 aa6.09□□□□□ -1.43
TNPO1-212ENST00000520850 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
TNPO1-212ENST00000520850 SPRR2DP22532 72 aa6.08□□□□□ -1.44
TNPO1-212ENST00000520850 RPS28P62857 69 aaKnown RBP6.06□□□□□ -1.44
TNPO1-212ENST00000520850 MT1EP04732 61 aa6.04□□□□□ -1.44
TNPO1-212ENST00000520850 PCP4P48539 62 aa6.03□□□□□ -1.44
TNPO1-212ENST00000520850 PSPHP1O15172 72 aa6.02□□□□□ -1.45
TNPO1-212ENST00000520850 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
TNPO1-212ENST00000520850 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
TNPO1-212ENST00000520850 K7ERS5 55 aa5.97□□□□□ -1.45
TNPO1-212ENST00000520850 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
TNPO1-212ENST00000520850 KRTAP19-3Q7Z4W3 81 aa5.97□□□□□ -1.45
TNPO1-212ENST00000520850 LCE3AQ5TA76 89 aa5.92□□□□□ -1.46
TNPO1-212ENST00000520850 MT1GP13640 62 aa5.9□□□□□ -1.46
TNPO1-212ENST00000520850 KRTAP25-1Q3LHN0 102 aa5.86□□□□□ -1.47
TNPO1-212ENST00000520850 A6NED7 52 aa5.85□□□□□ -1.47
TNPO1-212ENST00000520850 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
TNPO1-212ENST00000520850 MT1LQ93083 61 aa5.81□□□□□ -1.48
TNPO1-212ENST00000520850 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
TNPO1-212ENST00000520850 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
TNPO1-212ENST00000520850 MT1MQ8N339 61 aa5.73□□□□□ -1.49
TNPO1-212ENST00000520850 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
TNPO1-212ENST00000520850 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
TNPO1-212ENST00000520850 ROMO1P60602 79 aa5.58□□□□□ -1.52
TNPO1-212ENST00000520850 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
TNPO1-212ENST00000520850 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
TNPO1-212ENST00000520850 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
TNPO1-212ENST00000520850 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
TNPO1-212ENST00000520850 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
TNPO1-212ENST00000520850 MT4P47944 62 aa5.26□□□□□ -1.57
TNPO1-212ENST00000520850 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
TNPO1-212ENST00000520850 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
TNPO1-212ENST00000520850 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.16□□□□□ -1.58
TNPO1-212ENST00000520850 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
TNPO1-212ENST00000520850 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
TNPO1-212ENST00000520850 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
TNPO1-212ENST00000520850 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
TNPO1-212ENST00000520850 KRTAP5-11Q6L8G4 156 aa4.99□□□□□ -1.61
TNPO1-212ENST00000520850 GPR98Q8WXG9 6306 aa4.97□□□□□ -1.61
TNPO1-212ENST00000520850 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
TNPO1-212ENST00000520850 MT1AP04731 61 aa4.96□□□□□ -1.62
TNPO1-212ENST00000520850 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
TNPO1-212ENST00000520850 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
TNPO1-212ENST00000520850 KRTAP5-10Q6L8G5 202 aa4.9□□□□□ -1.63
TNPO1-212ENST00000520850 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
TNPO1-212ENST00000520850 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
TNPO1-212ENST00000520850 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
TNPO1-212ENST00000520850 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
TNPO1-212ENST00000520850 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
TNPO1-212ENST00000520850 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
TNPO1-212ENST00000520850 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
TNPO1-212ENST00000520850 MT3P25713 68 aa4.55□□□□□ -1.68
TNPO1-212ENST00000520850 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
TNPO1-212ENST00000520850 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
TNPO1-212ENST00000520850 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
TNPO1-212ENST00000520850 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
TNPO1-212ENST00000520850 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
TNPO1-212ENST00000520850 SVIPQ8NHG7 77 aa4.17□□□□□ -1.74
TNPO1-212ENST00000520850 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
TNPO1-212ENST00000520850 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
TNPO1-212ENST00000520850 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
TNPO1-212ENST00000520850 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.78
TNPO1-212ENST00000520850 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
TNPO1-212ENST00000520850 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
TNPO1-212ENST00000520850 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
TNPO1-212ENST00000520850 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
TNPO1-212ENST00000520850 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
TNPO1-212ENST00000520850 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
TNPO1-212ENST00000520850 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
TNPO1-212ENST00000520850 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
TNPO1-212ENST00000520850 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
TNPO1-212ENST00000520850 PRM1P04553 51 aa2.82□□□□□ -1.96
TNPO1-212ENST00000520850 INE1O15225 51 aa2.77□□□□□ -1.97
TNPO1-212ENST00000520850 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
TNPO1-212ENST00000520850 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
TNPO1-212ENST00000520850 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 73.5 ms