RNA–Protein interactions for RNA: ENST00000518381.5

CTNNA1-208, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-208ENST00000518381 TMEM258P61165 79 aa2.55□□□□□ -2
CTNNA1-208ENST00000518381 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
CTNNA1-208ENST00000518381 SERP1Q9Y6X1 66 aa2.55□□□□□ -2
CTNNA1-208ENST00000518381 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
CTNNA1-208ENST00000518381 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
CTNNA1-208ENST00000518381 HMCN1Q96RW7 5635 aa2.53□□□□□ -2.01
CTNNA1-208ENST00000518381 A0A1B0GU33 70 aa2.52□□□□□ -2.01
CTNNA1-208ENST00000518381 PCP4P48539 62 aa2.52□□□□□ -2.01
CTNNA1-208ENST00000518381 A0A0D9SG42 100 aa2.51□□□□□ -2.01
CTNNA1-208ENST00000518381 A0A1B0GU69 56 aa2.51□□□□□ -2.01
CTNNA1-208ENST00000518381 MT4P47944 62 aa2.5□□□□□ -2.01
CTNNA1-208ENST00000518381 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
CTNNA1-208ENST00000518381 LINC01558Q9Y6Z2 57 aa2.48□□□□□ -2.01
CTNNA1-208ENST00000518381 A8MU10 97 aa2.46□□□□□ -2.02
CTNNA1-208ENST00000518381 KRTAP19-3Q7Z4W3 81 aa2.46□□□□□ -2.02
CTNNA1-208ENST00000518381 SPINT4Q6UDR6 99 aa2.45□□□□□ -2.02
CTNNA1-208ENST00000518381 PRR15LQ9BU68 103 aa2.45□□□□□ -2.02
CTNNA1-208ENST00000518381 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
CTNNA1-208ENST00000518381 CAMK2N1Q7Z7J9 78 aa2.43□□□□□ -2.02
CTNNA1-208ENST00000518381 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
CTNNA1-208ENST00000518381 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
CTNNA1-208ENST00000518381 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
CTNNA1-208ENST00000518381 PSPHP1O15172 72 aa2.41□□□□□ -2.02
CTNNA1-208ENST00000518381 MT1EP04732 61 aa2.41□□□□□ -2.02
CTNNA1-208ENST00000518381 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
CTNNA1-208ENST00000518381 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
CTNNA1-208ENST00000518381 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
CTNNA1-208ENST00000518381 Q1T7F1 81 aa2.4□□□□□ -2.03
CTNNA1-208ENST00000518381 UQCR11O14957 56 aa2.38□□□□□ -2.03
CTNNA1-208ENST00000518381 RPS28P62857 69 aaKnown RBP2.38□□□□□ -2.03
CTNNA1-208ENST00000518381 V9GYY9 64 aa2.38□□□□□ -2.03
CTNNA1-208ENST00000518381 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
CTNNA1-208ENST00000518381 MT1GP13640 62 aa2.37□□□□□ -2.03
CTNNA1-208ENST00000518381 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
CTNNA1-208ENST00000518381 MIR22HGQ0VDD5 57 aa2.36□□□□□ -2.03
CTNNA1-208ENST00000518381 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
CTNNA1-208ENST00000518381 A6NED7 52 aa2.31□□□□□ -2.04
CTNNA1-208ENST00000518381 MT1MQ8N339 61 aa2.31□□□□□ -2.04
CTNNA1-208ENST00000518381 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
CTNNA1-208ENST00000518381 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
CTNNA1-208ENST00000518381 K7ERS5 55 aa2.26□□□□□ -2.05
CTNNA1-208ENST00000518381 TNP1P09430 55 aa2.26□□□□□ -2.05
CTNNA1-208ENST00000518381 MT1LQ93083 61 aa2.25□□□□□ -2.05
CTNNA1-208ENST00000518381 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
CTNNA1-208ENST00000518381 CDC42SE1Q9NRR8 79 aa2.22□□□□□ -2.05
CTNNA1-208ENST00000518381 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
CTNNA1-208ENST00000518381 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
CTNNA1-208ENST00000518381 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
CTNNA1-208ENST00000518381 KRTAP25-1Q3LHN0 102 aa2.18□□□□□ -2.06
CTNNA1-208ENST00000518381 ROMO1P60602 79 aa2.15□□□□□ -2.07
CTNNA1-208ENST00000518381 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
CTNNA1-208ENST00000518381 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
CTNNA1-208ENST00000518381 A0A0A0MQY5 61 aa2.14□□□□□ -2.07
CTNNA1-208ENST00000518381 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
CTNNA1-208ENST00000518381 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
CTNNA1-208ENST00000518381 BRK1Q8WUW1 75 aa2.13□□□□□ -2.07
CTNNA1-208ENST00000518381 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
CTNNA1-208ENST00000518381 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
CTNNA1-208ENST00000518381 PMAIP1Q13794 54 aa2.02□□□□□ -2.09
CTNNA1-208ENST00000518381 SVIPQ8NHG7 77 aa2.01□□□□□ -2.09
CTNNA1-208ENST00000518381 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
CTNNA1-208ENST00000518381 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
CTNNA1-208ENST00000518381 PRAC1Q96KF2 57 aa1.95□□□□□ -2.1
CTNNA1-208ENST00000518381 PRO0628Q9UI54 55 aa1.94□□□□□ -2.1
CTNNA1-208ENST00000518381 MT1AP04731 61 aa1.92□□□□□ -2.1
CTNNA1-208ENST00000518381 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CTNNA1-208ENST00000518381 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
CTNNA1-208ENST00000518381 NDUFAF8A1L188 74 aa1.87□□□□□ -2.11
CTNNA1-208ENST00000518381 KTN1-AS1Q86SY8 53 aa1.82□□□□□ -2.12
CTNNA1-208ENST00000518381 LCE3DQ9BYE3 92 aa1.68□□□□□ -2.14
CTNNA1-208ENST00000518381 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
CTNNA1-208ENST00000518381 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
CTNNA1-208ENST00000518381 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
CTNNA1-208ENST00000518381 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
CTNNA1-208ENST00000518381 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
CTNNA1-208ENST00000518381 PRM1P04553 51 aa1.14□□□□□ -2.23
CTNNA1-208ENST00000518381 INE1O15225 51 aa1.1□□□□□ -2.23
CTNNA1-208ENST00000518381 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 115.4 ms