RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
FAM49B-208ENST00000518344 MT1EP04732 61 aa6.94□□□□□ -1.3
FAM49B-208ENST00000518344 UQCR11O14957 56 aa6.93□□□□□ -1.3
FAM49B-208ENST00000518344 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
FAM49B-208ENST00000518344 TNP1P09430 55 aa6.89□□□□□ -1.31
FAM49B-208ENST00000518344 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
FAM49B-208ENST00000518344 KRTAP19-3Q7Z4W3 81 aa6.85□□□□□ -1.31
FAM49B-208ENST00000518344 MIR22HGQ0VDD5 57 aa6.8□□□□□ -1.32
FAM49B-208ENST00000518344 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
FAM49B-208ENST00000518344 V9GYY9 64 aa6.78□□□□□ -1.32
FAM49B-208ENST00000518344 PSPHP1O15172 72 aa6.76□□□□□ -1.33
FAM49B-208ENST00000518344 Q1T7F1 81 aa6.72□□□□□ -1.33
FAM49B-208ENST00000518344 MT1GP13640 62 aa6.71□□□□□ -1.34
FAM49B-208ENST00000518344 K7ERS5 55 aa6.66□□□□□ -1.34
FAM49B-208ENST00000518344 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
FAM49B-208ENST00000518344 MT1LQ93083 61 aa6.65□□□□□ -1.34
FAM49B-208ENST00000518344 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
FAM49B-208ENST00000518344 MT1MQ8N339 61 aa6.59□□□□□ -1.35
FAM49B-208ENST00000518344 A6NED7 52 aa6.54□□□□□ -1.36
FAM49B-208ENST00000518344 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
FAM49B-208ENST00000518344 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
FAM49B-208ENST00000518344 PCP4P48539 62 aa6.52□□□□□ -1.37
FAM49B-208ENST00000518344 RPS28P62857 69 aaKnown RBP6.47□□□□□ -1.37
FAM49B-208ENST00000518344 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.38
FAM49B-208ENST00000518344 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
FAM49B-208ENST00000518344 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
FAM49B-208ENST00000518344 MT4P47944 62 aa6.25□□□□□ -1.41
FAM49B-208ENST00000518344 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
FAM49B-208ENST00000518344 ROMO1P60602 79 aa6.22□□□□□ -1.41
FAM49B-208ENST00000518344 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
FAM49B-208ENST00000518344 HMCN1Q96RW7 5635 aa6.11□□□□□ -1.43
FAM49B-208ENST00000518344 GPR98Q8WXG9 6306 aa6.07□□□□□ -1.44
FAM49B-208ENST00000518344 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
FAM49B-208ENST00000518344 KRTAP5-5Q701N2 237 aaPredicted RBP6□□□□□ -1.45
FAM49B-208ENST00000518344 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
FAM49B-208ENST00000518344 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
FAM49B-208ENST00000518344 AHNAK2Q8IVF2 5795 aa5.83□□□□□ -1.48
FAM49B-208ENST00000518344 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
FAM49B-208ENST00000518344 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
FAM49B-208ENST00000518344 BRK1Q8WUW1 75 aa5.74□□□□□ -1.49
FAM49B-208ENST00000518344 KRTAP5-10Q6L8G5 202 aa5.73□□□□□ -1.49
FAM49B-208ENST00000518344 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
FAM49B-208ENST00000518344 MT1AP04731 61 aa5.66□□□□□ -1.5
FAM49B-208ENST00000518344 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
FAM49B-208ENST00000518344 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.54□□□□□ -1.52
FAM49B-208ENST00000518344 KRTAP5-7Q6L8G8 165 aa5.48□□□□□ -1.53
FAM49B-208ENST00000518344 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
FAM49B-208ENST00000518344 PMAIP1Q13794 54 aa5.4□□□□□ -1.54
FAM49B-208ENST00000518344 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
FAM49B-208ENST00000518344 KRTAP5-11Q6L8G4 156 aa5.25□□□□□ -1.57
FAM49B-208ENST00000518344 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
FAM49B-208ENST00000518344 MT3P25713 68 aa5.18□□□□□ -1.58
FAM49B-208ENST00000518344 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
FAM49B-208ENST00000518344 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
FAM49B-208ENST00000518344 PRO0628Q9UI54 55 aa5.03□□□□□ -1.6
FAM49B-208ENST00000518344 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
FAM49B-208ENST00000518344 KTN1-AS1Q86SY8 53 aa4.81□□□□□ -1.64
FAM49B-208ENST00000518344 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
FAM49B-208ENST00000518344 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
FAM49B-208ENST00000518344 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
FAM49B-208ENST00000518344 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
FAM49B-208ENST00000518344 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
FAM49B-208ENST00000518344 KRTAP4-4Q9BYR3 166 aa4.62□□□□□ -1.67
FAM49B-208ENST00000518344 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
FAM49B-208ENST00000518344 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
FAM49B-208ENST00000518344 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
FAM49B-208ENST00000518344 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
FAM49B-208ENST00000518344 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
FAM49B-208ENST00000518344 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
FAM49B-208ENST00000518344 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
FAM49B-208ENST00000518344 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
FAM49B-208ENST00000518344 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
FAM49B-208ENST00000518344 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
FAM49B-208ENST00000518344 PRM1P04553 51 aa3.2□□□□□ -1.9
FAM49B-208ENST00000518344 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
FAM49B-208ENST00000518344 INE1O15225 51 aa2.86□□□□□ -1.95
FAM49B-208ENST00000518344 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
FAM49B-208ENST00000518344 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 108.3 ms