RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 ETDBQ3ZM63 59 aa2.23□□□□□ -2.05
PABPC1-204ENST00000517990 COL5A1-AS1Q5SY13 56 aa2.23□□□□□ -2.05
PABPC1-204ENST00000517990 A0A0D9SG42 100 aa2.2□□□□□ -2.06
PABPC1-204ENST00000517990 FAM240AA0A1B0GVK7 77 aa2.2□□□□□ -2.06
PABPC1-204ENST00000517990 CHKB-CPT1BH3BT56 60 aa2.2□□□□□ -2.06
PABPC1-204ENST00000517990 MT1MQ8N339 61 aa2.2□□□□□ -2.06
PABPC1-204ENST00000517990 OCR1Q9BZK8 76 aa2.2□□□□□ -2.06
PABPC1-204ENST00000517990 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
PABPC1-204ENST00000517990 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
PABPC1-204ENST00000517990 LINC00643Q86TS7 51 aa2.17□□□□□ -2.06
PABPC1-204ENST00000517990 MT1LQ93083 61 aa2.16□□□□□ -2.06
PABPC1-204ENST00000517990 SCGB1A1P11684 91 aa2.15□□□□□ -2.07
PABPC1-204ENST00000517990 PRAC1Q96KF2 57 aa2.14□□□□□ -2.07
PABPC1-204ENST00000517990 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
PABPC1-204ENST00000517990 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
PABPC1-204ENST00000517990 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
PABPC1-204ENST00000517990 SPINT4Q6UDR6 99 aa2.11□□□□□ -2.07
PABPC1-204ENST00000517990 SEC61GP60059 68 aa2.09□□□□□ -2.07
PABPC1-204ENST00000517990 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
PABPC1-204ENST00000517990 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
PABPC1-204ENST00000517990 SERP1Q9Y6X1 66 aa2.08□□□□□ -2.08
PABPC1-204ENST00000517990 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
PABPC1-204ENST00000517990 TNP1P09430 55 aa2.05□□□□□ -2.08
PABPC1-204ENST00000517990 SMIM20Q8N5G0 67 aa2.04□□□□□ -2.08
PABPC1-204ENST00000517990 LOC105371267A0A1B0GV96 52 aa2.02□□□□□ -2.09
PABPC1-204ENST00000517990 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
PABPC1-204ENST00000517990 A0A1B0GU33 70 aa2.01□□□□□ -2.09
PABPC1-204ENST00000517990 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
PABPC1-204ENST00000517990 J3QR89 54 aa2□□□□□ -2.09
PABPC1-204ENST00000517990 SPANXA2-OT1Q8N9U9 137 aa2□□□□□ -2.09
PABPC1-204ENST00000517990 SMIM26A0A096LP01 95 aa1.99□□□□□ -2.09
PABPC1-204ENST00000517990 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
PABPC1-204ENST00000517990 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
PABPC1-204ENST00000517990 A8MU10 97 aa1.97□□□□□ -2.09
PABPC1-204ENST00000517990 PCP4L1A6NKN8 68 aa1.96□□□□□ -2.1
PABPC1-204ENST00000517990 SNURFQ9Y675 71 aa1.96□□□□□ -2.1
PABPC1-204ENST00000517990 COA5Q86WW8 74 aa1.95□□□□□ -2.1
PABPC1-204ENST00000517990 SERP2Q8N6R1 65 aa1.93□□□□□ -2.1
PABPC1-204ENST00000517990 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
PABPC1-204ENST00000517990 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
PABPC1-204ENST00000517990 A0A1B0GU69 56 aa1.9□□□□□ -2.11
PABPC1-204ENST00000517990 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
PABPC1-204ENST00000517990 MT1AP04731 61 aa1.85□□□□□ -2.11
PABPC1-204ENST00000517990 A0A1B0GV90 55 aa1.84□□□□□ -2.11
PABPC1-204ENST00000517990 KRTAP25-1Q3LHN0 102 aa1.84□□□□□ -2.11
PABPC1-204ENST00000517990 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
PABPC1-204ENST00000517990 PRR15LQ9BU68 103 aa1.82□□□□□ -2.12
PABPC1-204ENST00000517990 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
PABPC1-204ENST00000517990 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
PABPC1-204ENST00000517990 K7ERU9 68 aa1.78□□□□□ -2.12
PABPC1-204ENST00000517990 H7BZZ5 65 aa1.77□□□□□ -2.13
PABPC1-204ENST00000517990 K7ERS5 55 aa1.73□□□□□ -2.13
PABPC1-204ENST00000517990 UQCR11O14957 56 aa1.71□□□□□ -2.14
PABPC1-204ENST00000517990 COX7CP15954 63 aa1.71□□□□□ -2.14
PABPC1-204ENST00000517990 LINC01558Q9Y6Z2 57 aa1.67□□□□□ -2.14
PABPC1-204ENST00000517990 RPS28P62857 69 aaKnown RBP1.64□□□□□ -2.15
PABPC1-204ENST00000517990 MIR22HGQ0VDD5 57 aa1.64□□□□□ -2.15
PABPC1-204ENST00000517990 LCE3DQ9BYE3 92 aa1.62□□□□□ -2.15
PABPC1-204ENST00000517990 V9GYY9 64 aa1.62□□□□□ -2.15
PABPC1-204ENST00000517990 ATP5EP56381 51 aaPredicted RBP1.61□□□□□ -2.15
PABPC1-204ENST00000517990 CDC42SE1Q9NRR8 79 aa1.56□□□□□ -2.16
PABPC1-204ENST00000517990 ANAPC13Q9BS18 74 aa1.54□□□□□ -2.16
PABPC1-204ENST00000517990 Q1T7F1 81 aa1.5□□□□□ -2.17
PABPC1-204ENST00000517990 ROMO1P60602 79 aa1.49□□□□□ -2.17
PABPC1-204ENST00000517990 CCDC179H3BU77 68 aa1.46□□□□□ -2.18
PABPC1-204ENST00000517990 TMEM258P61165 79 aa1.46□□□□□ -2.18
PABPC1-204ENST00000517990 PSPHP1O15172 72 aa1.45□□□□□ -2.18
PABPC1-204ENST00000517990 PRO0628Q9UI54 55 aa1.44□□□□□ -2.18
PABPC1-204ENST00000517990 A6NED7 52 aa1.43□□□□□ -2.18
PABPC1-204ENST00000517990 PMAIP1Q13794 54 aa1.41□□□□□ -2.18
PABPC1-204ENST00000517990 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
PABPC1-204ENST00000517990 LUZP6Q538Z0 58 aa1.32□□□□□ -2.2
PABPC1-204ENST00000517990 KTN1-AS1Q86SY8 53 aa1.25□□□□□ -2.21
PABPC1-204ENST00000517990 BRK1Q8WUW1 75 aa1.2□□□□□ -2.22
PABPC1-204ENST00000517990 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
PABPC1-204ENST00000517990 INE1O15225 51 aa0.95□□□□□ -2.26
PABPC1-204ENST00000517990 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
PABPC1-204ENST00000517990 PRM1P04553 51 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 48.6 ms