RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
CTNNA1-202ENST00000517533 BIRC6Q9NR09 4857 aa1.31□□□□□ -2.2
CTNNA1-202ENST00000517533 COX6B2Q6YFQ2 88 aa1.31□□□□□ -2.2
CTNNA1-202ENST00000517533 DMBT1Q9UGM3 2413 aaPredicted RBP1.31□□□□□ -2.2
CTNNA1-202ENST00000517533 LRP1Q07954 4544 aaKnown RBP1.3□□□□□ -2.2
CTNNA1-202ENST00000517533 PKHD1L1Q86WI1 4243 aa1.3□□□□□ -2.2
CTNNA1-202ENST00000517533 FAT3Q8TDW7 4589 aa1.29□□□□□ -2.2
CTNNA1-202ENST00000517533 HERC2O95714 4834 aa1.29□□□□□ -2.2
CTNNA1-202ENST00000517533 MYCBP2O75592 4640 aa1.29□□□□□ -2.2
CTNNA1-202ENST00000517533 ABCA13Q86UQ4 5058 aa1.28□□□□□ -2.2
CTNNA1-202ENST00000517533 KRTAP2-3P0C7H8 128 aa1.28□□□□□ -2.2
CTNNA1-202ENST00000517533 KRTAP2-4Q9BYR9 128 aa1.28□□□□□ -2.2
CTNNA1-202ENST00000517533 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
CTNNA1-202ENST00000517533 TNXBP22105 4242 aa1.27□□□□□ -2.21
CTNNA1-202ENST00000517533 PCLOQ9Y6V0 5065 aa1.25□□□□□ -2.21
CTNNA1-202ENST00000517533 H0YAA0 97 aa1.24□□□□□ -2.21
CTNNA1-202ENST00000517533 HERC1Q15751 4861 aa1.22□□□□□ -2.21
CTNNA1-202ENST00000517533 LRP2P98164 4655 aa1.21□□□□□ -2.22
CTNNA1-202ENST00000517533 M0QZ58 72 aa1.21□□□□□ -2.22
CTNNA1-202ENST00000517533 LPAP08519 4548 aa1.2□□□□□ -2.22
CTNNA1-202ENST00000517533 HMCN2Q8NDA2 5059 aa1.2□□□□□ -2.22
CTNNA1-202ENST00000517533 S4R3F8 94 aa1.2□□□□□ -2.22
CTNNA1-202ENST00000517533 M0R2T5 61 aa1.16□□□□□ -2.22
CTNNA1-202ENST00000517533 MUC17Q685J3 4493 aa1.16□□□□□ -2.22
CTNNA1-202ENST00000517533 MUC2Q02817 5179 aa1.15□□□□□ -2.22
CTNNA1-202ENST00000517533 UBR4Q5T4S7 5183 aa1.15□□□□□ -2.23
CTNNA1-202ENST00000517533 RNF213Q63HN8 5207 aa1.14□□□□□ -2.23
CTNNA1-202ENST00000517533 KRTAP19-2Q3LHN2 52 aa1.14□□□□□ -2.23
CTNNA1-202ENST00000517533 MT1HP80294 61 aa1.12□□□□□ -2.23
CTNNA1-202ENST00000517533 FLGP20930 4061 aaPredicted RBP1.11□□□□□ -2.23
CTNNA1-202ENST00000517533 FAT4Q6V0I7 4981 aa1.1□□□□□ -2.23
CTNNA1-202ENST00000517533 TNP1P09430 55 aa1.09□□□□□ -2.23
CTNNA1-202ENST00000517533 MT2AP02795 61 aa1.07□□□□□ -2.24
CTNNA1-202ENST00000517533 SPRR2GQ9BYE4 73 aa1.06□□□□□ -2.24
CTNNA1-202ENST00000517533 MT1FP04733 61 aa1.05□□□□□ -2.24
CTNNA1-202ENST00000517533 KRTAP19-8Q3LI54 63 aa1.03□□□□□ -2.24
CTNNA1-202ENST00000517533 MT1BP07438 61 aa1□□□□□ -2.25
CTNNA1-202ENST00000517533 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
CTNNA1-202ENST00000517533 MT1XP80297 61 aa0.97□□□□□ -2.25
CTNNA1-202ENST00000517533 USH2AO75445 5202 aa0.97□□□□□ -2.25
CTNNA1-202ENST00000517533 KRTAP19-6Q3LI70 58 aa0.95□□□□□ -2.26
CTNNA1-202ENST00000517533 SSPOA2VEC9 5147 aa0.94□□□□□ -2.26
CTNNA1-202ENST00000517533 PRM1P04553 51 aa0.93□□□□□ -2.26
CTNNA1-202ENST00000517533 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
CTNNA1-202ENST00000517533 FSIP2Q5CZC0 6907 aa0.92□□□□□ -2.26
CTNNA1-202ENST00000517533 KRTAP8-1Q8IUC2 63 aa0.92□□□□□ -2.26
CTNNA1-202ENST00000517533 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
CTNNA1-202ENST00000517533 KRTAP19-5Q3LI72 72 aa0.89□□□□□ -2.27
CTNNA1-202ENST00000517533 KMT2DO14686 5537 aa0.86□□□□□ -2.27
CTNNA1-202ENST00000517533 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CTNNA1-202ENST00000517533 KRTAP19-7Q3SYF9 63 aa0.86□□□□□ -2.27
CTNNA1-202ENST00000517533 SPRR2FQ96RM1 72 aa0.86□□□□□ -2.27
CTNNA1-202ENST00000517533 MT1EP04732 61 aa0.85□□□□□ -2.27
CTNNA1-202ENST00000517533 MT1GP13640 62 aa0.84□□□□□ -2.27
CTNNA1-202ENST00000517533 MT1LQ93083 61 aa0.84□□□□□ -2.27
CTNNA1-202ENST00000517533 MUC12Q9UKN1 5478 aa0.82□□□□□ -2.28
CTNNA1-202ENST00000517533 SPRR2EP22531 72 aa0.81□□□□□ -2.28
CTNNA1-202ENST00000517533 SPRR2BP35325 72 aa0.81□□□□□ -2.28
CTNNA1-202ENST00000517533 SPRR2AP35326 72 aa0.81□□□□□ -2.28
CTNNA1-202ENST00000517533 SYNE2Q8WXH0 6885 aaKnown RBP0.81□□□□□ -2.28
CTNNA1-202ENST00000517533 MDN1Q9NU22 5596 aa0.8□□□□□ -2.28
CTNNA1-202ENST00000517533 MACF1Q9UPN3 7388 aaKnown RBP0.8□□□□□ -2.28
CTNNA1-202ENST00000517533 MT1MQ8N339 61 aa0.8□□□□□ -2.28
CTNNA1-202ENST00000517533 SPRR2DP22532 72 aa0.79□□□□□ -2.28
CTNNA1-202ENST00000517533 NEBP20929 6669 aa0.72□□□□□ -2.29
CTNNA1-202ENST00000517533 MT1AP04731 61 aa0.72□□□□□ -2.29
CTNNA1-202ENST00000517533 KRTAP20-1Q3LI63 56 aa0.72□□□□□ -2.29
CTNNA1-202ENST00000517533 DSTQ03001 7570 aaKnown RBP0.71□□□□□ -2.3
CTNNA1-202ENST00000517533 KRTAP6-1Q3LI64 71 aa0.7□□□□□ -2.3
CTNNA1-202ENST00000517533 MT4P47944 62 aa0.67□□□□□ -2.3
CTNNA1-202ENST00000517533 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
CTNNA1-202ENST00000517533 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
CTNNA1-202ENST00000517533 AHNAK2Q8IVF2 5795 aa0.63□□□□□ -2.31
CTNNA1-202ENST00000517533 GPR98Q8WXG9 6306 aa0.59□□□□□ -2.31
CTNNA1-202ENST00000517533 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
CTNNA1-202ENST00000517533 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
CTNNA1-202ENST00000517533 AHNAKQ09666 5890 aaKnown RBP0.55□□□□□ -2.32
CTNNA1-202ENST00000517533 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 60.9 ms