RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 MT1MQ8N339 61 aa-0.51□□□□□ -2.49
SCARNA3-201ENST00000517097 DNHD1Q96M86 4753 aa-0.51□□□□□ -2.49
SCARNA3-201ENST00000517097 MT2AP02795 61 aa-0.52□□□□□ -2.49
SCARNA3-201ENST00000517097 ATMQ13315 3056 aa-0.53□□□□□ -2.5
SCARNA3-201ENST00000517097 K7EIM0 57 aa-0.54□□□□□ -2.5
SCARNA3-201ENST00000517097 PRCDQ00LT1 54 aa-0.54□□□□□ -2.5
SCARNA3-201ENST00000517097 DEFB133Q30KQ1 61 aa-0.55□□□□□ -2.5
SCARNA3-201ENST00000517097 HTN1P15515 57 aa-0.56□□□□□ -2.5
SCARNA3-201ENST00000517097 CSMD2Q7Z408 3487 aa-0.57□□□□□ -2.5
SCARNA3-201ENST00000517097 DEFB124Q8NES8 71 aa-0.57□□□□□ -2.5
SCARNA3-201ENST00000517097 ITPR2Q14571 2701 aa-0.58□□□□□ -2.5
SCARNA3-201ENST00000517097 CEP295Q9C0D2 2601 aa-0.58□□□□□ -2.5
SCARNA3-201ENST00000517097 TTTY10Q9BZA0 68 aa-0.58□□□□□ -2.5
SCARNA3-201ENST00000517097 DNAH5Q8TE73 4624 aa-0.59□□□□□ -2.5
SCARNA3-201ENST00000517097 PRUNE2Q8WUY3 3088 aa-0.59□□□□□ -2.5
SCARNA3-201ENST00000517097 RPS29P62273 56 aaKnown RBP-0.59□□□□□ -2.5
SCARNA3-201ENST00000517097 FRYLO94915 3013 aa-0.6□□□□□ -2.51
SCARNA3-201ENST00000517097 SMG1Q96Q15 3661 aaKnown RBP-0.6□□□□□ -2.51
SCARNA3-201ENST00000517097 MYO15AQ9UKN7 3530 aa-0.61□□□□□ -2.51
SCARNA3-201ENST00000517097 H3BUX3 64 aa-0.61□□□□□ -2.51
SCARNA3-201ENST00000517097 EPPK1P58107 5090 aaKnown RBP-0.61□□□□□ -2.51
SCARNA3-201ENST00000517097 VPS13CQ709C8 3753 aa-0.61□□□□□ -2.51
SCARNA3-201ENST00000517097 DNAH12Q6ZR08 3092 aa-0.63□□□□□ -2.51
SCARNA3-201ENST00000517097 H3BSH0 61 aa-0.64□□□□□ -2.51
SCARNA3-201ENST00000517097 DMDP11532 3685 aa-0.65□□□□□ -2.51
SCARNA3-201ENST00000517097 BIRC6Q9NR09 4857 aa-0.65□□□□□ -2.51
SCARNA3-201ENST00000517097 MT1BP07438 61 aa-0.65□□□□□ -2.51
SCARNA3-201ENST00000517097 CEP350Q5VT06 3117 aa-0.66□□□□□ -2.51
SCARNA3-201ENST00000517097 TMEM167AQ8TBQ9 72 aa-0.66□□□□□ -2.52
SCARNA3-201ENST00000517097 RNF213Q63HN8 5207 aa-0.67□□□□□ -2.52
SCARNA3-201ENST00000517097 NEBP20929 6669 aa-0.67□□□□□ -2.52
SCARNA3-201ENST00000517097 HYDINQ4G0P3 5121 aa-0.69□□□□□ -2.52
SCARNA3-201ENST00000517097 FREM2Q5SZK8 3169 aa-0.69□□□□□ -2.52
SCARNA3-201ENST00000517097 CD52P31358 61 aa-0.69□□□□□ -2.52
SCARNA3-201ENST00000517097 RYR3Q15413 4870 aa-0.69□□□□□ -2.52
SCARNA3-201ENST00000517097 PCNTO95613 3336 aa-0.69□□□□□ -2.52
SCARNA3-201ENST00000517097 WDFY4Q6ZS81 3184 aa-0.72□□□□□ -2.52
SCARNA3-201ENST00000517097 RPL39P5Q59GN2 51 aa-0.74□□□□□ -2.53
SCARNA3-201ENST00000517097 XIRP2A4UGR9 3374 aa-0.74□□□□□ -2.53
SCARNA3-201ENST00000517097 RYR2Q92736 4967 aa-0.74□□□□□ -2.53
SCARNA3-201ENST00000517097 MT1FP04733 61 aa-0.76□□□□□ -2.53
SCARNA3-201ENST00000517097 MUC3AQ02505 3323 aa-0.77□□□□□ -2.53
SCARNA3-201ENST00000517097 CENPEQ02224 2701 aa-0.77□□□□□ -2.53
SCARNA3-201ENST00000517097 KIAA1109Q2LD37 5005 aa-0.78□□□□□ -2.53
SCARNA3-201ENST00000517097 SZT2Q5T011 3432 aa-0.79□□□□□ -2.54
SCARNA3-201ENST00000517097 MKI67P46013 3256 aaKnown RBP-0.79□□□□□ -2.54
SCARNA3-201ENST00000517097 DEFB108AA8MXU0 73 aa-0.79□□□□□ -2.54
SCARNA3-201ENST00000517097 DCHS1Q96JQ0 3298 aa-0.79□□□□□ -2.54
SCARNA3-201ENST00000517097 EP400Q96L91 3159 aa-0.79□□□□□ -2.54
SCARNA3-201ENST00000517097 LINC01556Q5JQF7 62 aa-0.8□□□□□ -2.54
SCARNA3-201ENST00000517097 BOD1L1Q8NFC6 3051 aa-0.82□□□□□ -2.54
SCARNA3-201ENST00000517097 SPEGQ15772 3267 aa-0.83□□□□□ -2.54
SCARNA3-201ENST00000517097 APELAP0DMC3 54 aa-0.84□□□□□ -2.54
SCARNA3-201ENST00000517097 A0A096LPF7 62 aa-0.86□□□□□ -2.55
SCARNA3-201ENST00000517097 WDFY3Q8IZQ1 3526 aa-0.86□□□□□ -2.55
SCARNA3-201ENST00000517097 LOC400499M0QZD8 3231 aa-0.87□□□□□ -2.55
SCARNA3-201ENST00000517097 UNC80Q8N2C7 3258 aa-0.91□□□□□ -2.55
SCARNA3-201ENST00000517097 KRTAP19-2Q3LHN2 52 aa-0.94□□□□□ -2.56
SCARNA3-201ENST00000517097 KRTAP20-1Q3LI63 56 aa-0.95□□□□□ -2.56
SCARNA3-201ENST00000517097 CFAP47Q6ZTR5 3102 aa-0.95□□□□□ -2.56
SCARNA3-201ENST00000517097 ABCA13Q86UQ4 5058 aa-0.96□□□□□ -2.56
SCARNA3-201ENST00000517097 USP34Q70CQ2 3546 aa-0.97□□□□□ -2.56
SCARNA3-201ENST00000517097 ASPMQ8IZT6 3477 aa-0.98□□□□□ -2.57
SCARNA3-201ENST00000517097 Q9Y3F1 56 aa-1.03□□□□□ -2.57
SCARNA3-201ENST00000517097 HTN3P15516 51 aa-1.05□□□□□ -2.58
SCARNA3-201ENST00000517097 BRCA2P51587 3418 aa-1.08□□□□□ -2.58
SCARNA3-201ENST00000517097 VCANP13611 3396 aa-1.11□□□□□ -2.59
SCARNA3-201ENST00000517097 DEFB108BQ8NET1 73 aa-1.13□□□□□ -2.59
SCARNA3-201ENST00000517097 KRTAP19-6Q3LI70 58 aa-1.14□□□□□ -2.59
SCARNA3-201ENST00000517097 DNAH14Q0VDD8 3507 aa-1.15□□□□□ -2.59
SCARNA3-201ENST00000517097 CENPFP49454 3210 aa-1.15□□□□□ -2.59
SCARNA3-201ENST00000517097 COX14Q96I36 57 aa-1.21□□□□□ -2.6
SCARNA3-201ENST00000517097 VPS13AQ96RL7 3174 aa-1.25□□□□□ -2.61
SCARNA3-201ENST00000517097 UTRNP46939 3433 aa-1.25□□□□□ -2.61
SCARNA3-201ENST00000517097 CDH23Q9H251 3354 aa-1.26□□□□□ -2.61
SCARNA3-201ENST00000517097 STATHP02808 62 aa-1.27□□□□□ -2.61
SCARNA3-201ENST00000517097 GOLGB1Q14789 3259 aaKnown RBP-1.29□□□□□ -2.62
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms