RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 DYNC1H1Q14204 4646 aaKnown RBP1.11□□□□□ -2.23
NIPBL-207ENST00000513819 IGSF10Q6WRI0 2623 aa1.11□□□□□ -2.23
NIPBL-207ENST00000513819 NSD1Q96L73 2696 aaPredicted RBP1.11□□□□□ -2.23
NIPBL-207ENST00000513819 MGAM2Q2M2H8 2515 aa1.09□□□□□ -2.23
NIPBL-207ENST00000513819 STARD9Q9P2P6 4700 aa1.07□□□□□ -2.24
NIPBL-207ENST00000513819 PKHD1P08F94 4074 aa1.06□□□□□ -2.24
NIPBL-207ENST00000513819 LPAP08519 4548 aa1.06□□□□□ -2.24
NIPBL-207ENST00000513819 MAST4O15021 2626 aa1.06□□□□□ -2.24
NIPBL-207ENST00000513819 MUC17Q685J3 4493 aa1.05□□□□□ -2.24
NIPBL-207ENST00000513819 FLNBO75369 2602 aaKnown RBP1.02□□□□□ -2.25
NIPBL-207ENST00000513819 MT1AP04731 61 aa1.02□□□□□ -2.25
NIPBL-207ENST00000513819 SPRR2GQ9BYE4 73 aa1.02□□□□□ -2.25
NIPBL-207ENST00000513819 FAT1Q14517 4588 aa1.02□□□□□ -2.25
NIPBL-207ENST00000513819 HERC1Q15751 4861 aa1.01□□□□□ -2.25
NIPBL-207ENST00000513819 LRP1BQ9NZR2 4599 aa0.99□□□□□ -2.25
NIPBL-207ENST00000513819 KRTAP19-2Q3LHN2 52 aa0.97□□□□□ -2.25
NIPBL-207ENST00000513819 KRTAP6-2Q3LI66 62 aa0.96□□□□□ -2.26
NIPBL-207ENST00000513819 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
NIPBL-207ENST00000513819 MT1XP80297 61 aa0.94□□□□□ -2.26
NIPBL-207ENST00000513819 MT1EP04732 61 aa0.93□□□□□ -2.26
NIPBL-207ENST00000513819 KRTAP19-8Q3LI54 63 aa0.92□□□□□ -2.26
NIPBL-207ENST00000513819 SPRR2DP22532 72 aa0.91□□□□□ -2.26
NIPBL-207ENST00000513819 SPRR2BP35325 72 aa0.91□□□□□ -2.26
NIPBL-207ENST00000513819 SPRR2FQ96RM1 72 aa0.91□□□□□ -2.26
NIPBL-207ENST00000513819 LRP2P98164 4655 aa0.91□□□□□ -2.26
NIPBL-207ENST00000513819 SPRR2AP35326 72 aa0.9□□□□□ -2.27
NIPBL-207ENST00000513819 KRTAP19-3Q7Z4W3 81 aa0.9□□□□□ -2.27
NIPBL-207ENST00000513819 MT1LQ93083 61 aa0.9□□□□□ -2.27
NIPBL-207ENST00000513819 MT1BP07438 61 aa0.85□□□□□ -2.27
NIPBL-207ENST00000513819 SPRR2EP22531 72 aa0.84□□□□□ -2.27
NIPBL-207ENST00000513819 KRTAP19-7Q3SYF9 63 aa0.84□□□□□ -2.27
NIPBL-207ENST00000513819 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
NIPBL-207ENST00000513819 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
NIPBL-207ENST00000513819 MT1HP80294 61 aa0.8□□□□□ -2.28
NIPBL-207ENST00000513819 HMCN2Q8NDA2 5059 aa0.79□□□□□ -2.28
NIPBL-207ENST00000513819 MT1HL1P0DM35 61 aa0.79□□□□□ -2.28
NIPBL-207ENST00000513819 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
NIPBL-207ENST00000513819 MUC2Q02817 5179 aa0.77□□□□□ -2.29
NIPBL-207ENST00000513819 MT1GP13640 62 aa0.77□□□□□ -2.29
NIPBL-207ENST00000513819 DNHD1Q96M86 4753 aa0.76□□□□□ -2.29
NIPBL-207ENST00000513819 HYDINQ4G0P3 5121 aa0.75□□□□□ -2.29
NIPBL-207ENST00000513819 MT1FP04733 61 aa0.74□□□□□ -2.29
NIPBL-207ENST00000513819 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
NIPBL-207ENST00000513819 MT2AP02795 61 aa0.73□□□□□ -2.29
NIPBL-207ENST00000513819 HERC2O95714 4834 aa0.73□□□□□ -2.29
NIPBL-207ENST00000513819 KRTAP6-1Q3LI64 71 aa0.7□□□□□ -2.3
NIPBL-207ENST00000513819 MT1MQ8N339 61 aa0.7□□□□□ -2.3
NIPBL-207ENST00000513819 KMT2CQ8NEZ4 4911 aaKnown RBP0.69□□□□□ -2.3
NIPBL-207ENST00000513819 RYR3Q15413 4870 aa0.69□□□□□ -2.3
NIPBL-207ENST00000513819 USH2AO75445 5202 aa0.68□□□□□ -2.3
NIPBL-207ENST00000513819 BIRC6Q9NR09 4857 aa0.67□□□□□ -2.3
NIPBL-207ENST00000513819 PCLOQ9Y6V0 5065 aa0.67□□□□□ -2.3
NIPBL-207ENST00000513819 UBR4Q5T4S7 5183 aa0.66□□□□□ -2.3
NIPBL-207ENST00000513819 RYR1P21817 5038 aa0.65□□□□□ -2.31
NIPBL-207ENST00000513819 RYR2Q92736 4967 aa0.64□□□□□ -2.31
NIPBL-207ENST00000513819 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
NIPBL-207ENST00000513819 RNF213Q63HN8 5207 aa0.62□□□□□ -2.31
NIPBL-207ENST00000513819 SSPOA2VEC9 5147 aa0.6□□□□□ -2.31
NIPBL-207ENST00000513819 FAT4Q6V0I7 4981 aa0.59□□□□□ -2.31
NIPBL-207ENST00000513819 GPR98Q8WXG9 6306 aa0.56□□□□□ -2.32
NIPBL-207ENST00000513819 ABCA13Q86UQ4 5058 aa0.55□□□□□ -2.32
NIPBL-207ENST00000513819 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
NIPBL-207ENST00000513819 EPPK1P58107 5090 aaKnown RBP0.54□□□□□ -2.32
NIPBL-207ENST00000513819 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
NIPBL-207ENST00000513819 KIAA1109Q2LD37 5005 aa0.52□□□□□ -2.33
NIPBL-207ENST00000513819 KMT2DO14686 5537 aa0.52□□□□□ -2.33
NIPBL-207ENST00000513819 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
NIPBL-207ENST00000513819 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
NIPBL-207ENST00000513819 KRTAP19-6Q3LI70 58 aa0.41□□□□□ -2.34
NIPBL-207ENST00000513819 MUC12Q9UKN1 5478 aa0.39□□□□□ -2.35
NIPBL-207ENST00000513819 MACF1Q9UPN3 7388 aaKnown RBP0.38□□□□□ -2.35
NIPBL-207ENST00000513819 DSTQ03001 7570 aaKnown RBP0.36□□□□□ -2.35
NIPBL-207ENST00000513819 SYNE2Q8WXH0 6885 aaKnown RBP0.33□□□□□ -2.36
NIPBL-207ENST00000513819 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
NIPBL-207ENST00000513819 KRTAP20-2Q3LI61 65 aa0.28□□□□□ -2.36
NIPBL-207ENST00000513819 MT4P47944 62 aa0.25□□□□□ -2.37
NIPBL-207ENST00000513819 KRTAP20-1Q3LI63 56 aa0.21□□□□□ -2.38
NIPBL-207ENST00000513819 NEBP20929 6669 aa0.19□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 15.3 ms