RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 MT1XP80297 61 aa3.43□□□□□ -1.86
SDHC-208ENST00000513009 A0A1B0GU69 56 aa3.42□□□□□ -1.86
SDHC-208ENST00000513009 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
SDHC-208ENST00000513009 A0A1B0GU33 70 aa3.41□□□□□ -1.86
SDHC-208ENST00000513009 PRR15LQ9BU68 103 aa3.4□□□□□ -1.87
SDHC-208ENST00000513009 TMEM258P61165 79 aa3.38□□□□□ -1.87
SDHC-208ENST00000513009 SMIM26A0A096LP01 95 aa3.36□□□□□ -1.87
SDHC-208ENST00000513009 A0A0D9SG42 100 aa3.36□□□□□ -1.87
SDHC-208ENST00000513009 SPINT4Q6UDR6 99 aa3.35□□□□□ -1.87
SDHC-208ENST00000513009 SPATA8Q6RVD6 105 aa3.33□□□□□ -1.88
SDHC-208ENST00000513009 KRTAP13-4Q3LI77 160 aa3.31□□□□□ -1.88
SDHC-208ENST00000513009 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
SDHC-208ENST00000513009 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
SDHC-208ENST00000513009 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
SDHC-208ENST00000513009 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
SDHC-208ENST00000513009 LINC01558Q9Y6Z2 57 aa3.26□□□□□ -1.89
SDHC-208ENST00000513009 UQCR11O14957 56 aa3.24□□□□□ -1.89
SDHC-208ENST00000513009 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
SDHC-208ENST00000513009 V9GYY9 64 aa3.23□□□□□ -1.89
SDHC-208ENST00000513009 KRTAP12-1P59990 96 aa3.22□□□□□ -1.89
SDHC-208ENST00000513009 K7ERS5 55 aa3.2□□□□□ -1.9
SDHC-208ENST00000513009 A8MU10 97 aa3.19□□□□□ -1.9
SDHC-208ENST00000513009 RPS28P62857 69 aaKnown RBP3.19□□□□□ -1.9
SDHC-208ENST00000513009 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
SDHC-208ENST00000513009 TNP1P09430 55 aa3.17□□□□□ -1.9
SDHC-208ENST00000513009 PSPHP1O15172 72 aa3.15□□□□□ -1.91
SDHC-208ENST00000513009 MIR22HGQ0VDD5 57 aa3.15□□□□□ -1.91
SDHC-208ENST00000513009 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.91
SDHC-208ENST00000513009 Q1T7F1 81 aa3.14□□□□□ -1.91
SDHC-208ENST00000513009 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
SDHC-208ENST00000513009 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
SDHC-208ENST00000513009 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
SDHC-208ENST00000513009 A6NED7 52 aa3.06□□□□□ -1.92
SDHC-208ENST00000513009 MT1EP04732 61 aa3.06□□□□□ -1.92
SDHC-208ENST00000513009 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
SDHC-208ENST00000513009 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
SDHC-208ENST00000513009 C10orf95Q9H7T3 257 aa3.05□□□□□ -1.92
SDHC-208ENST00000513009 MT4P47944 62 aa3.04□□□□□ -1.92
SDHC-208ENST00000513009 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
SDHC-208ENST00000513009 KRTAP25-1Q3LHN0 102 aa3.01□□□□□ -1.93
SDHC-208ENST00000513009 MT1GP13640 62 aa3□□□□□ -1.93
SDHC-208ENST00000513009 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
SDHC-208ENST00000513009 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
SDHC-208ENST00000513009 CDC42SE1Q9NRR8 79 aa2.96□□□□□ -1.94
SDHC-208ENST00000513009 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
SDHC-208ENST00000513009 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
SDHC-208ENST00000513009 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
SDHC-208ENST00000513009 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
SDHC-208ENST00000513009 MT1MQ8N339 61 aa2.93□□□□□ -1.94
SDHC-208ENST00000513009 BRK1Q8WUW1 75 aa2.9□□□□□ -1.95
SDHC-208ENST00000513009 MT1LQ93083 61 aa2.9□□□□□ -1.95
SDHC-208ENST00000513009 ROMO1P60602 79 aa2.88□□□□□ -1.95
SDHC-208ENST00000513009 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
SDHC-208ENST00000513009 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
SDHC-208ENST00000513009 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
SDHC-208ENST00000513009 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
SDHC-208ENST00000513009 PMAIP1Q13794 54 aa2.74□□□□□ -1.97
SDHC-208ENST00000513009 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
SDHC-208ENST00000513009 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
SDHC-208ENST00000513009 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
SDHC-208ENST00000513009 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
SDHC-208ENST00000513009 KRTAP5-8O75690 187 aa2.55□□□□□ -2
SDHC-208ENST00000513009 KTN1-AS1Q86SY8 53 aa2.55□□□□□ -2
SDHC-208ENST00000513009 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
SDHC-208ENST00000513009 MT1AP04731 61 aa2.49□□□□□ -2.01
SDHC-208ENST00000513009 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
SDHC-208ENST00000513009 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
SDHC-208ENST00000513009 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
SDHC-208ENST00000513009 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
SDHC-208ENST00000513009 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SDHC-208ENST00000513009 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
SDHC-208ENST00000513009 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SDHC-208ENST00000513009 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
SDHC-208ENST00000513009 INE1O15225 51 aa1.58□□□□□ -2.16
SDHC-208ENST00000513009 PRM1P04553 51 aa1.45□□□□□ -2.18
SDHC-208ENST00000513009 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
SDHC-208ENST00000513009 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 131.9 ms