RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 AHNAK2Q8IVF2 5795 aa5.78□□□□□ -1.48
MATR3-220ENST00000512876 ANAPC13Q9BS18 74 aa5.73□□□□□ -1.49
MATR3-220ENST00000512876 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
MATR3-220ENST00000512876 KRTAP5-10Q6L8G5 202 aa5.69□□□□□ -1.5
MATR3-220ENST00000512876 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
MATR3-220ENST00000512876 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
MATR3-220ENST00000512876 CCDC179H3BU77 68 aa5.66□□□□□ -1.5
MATR3-220ENST00000512876 ATP5EP56381 51 aaPredicted RBP5.66□□□□□ -1.5
MATR3-220ENST00000512876 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
MATR3-220ENST00000512876 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
MATR3-220ENST00000512876 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
MATR3-220ENST00000512876 UQCR11O14957 56 aa5.52□□□□□ -1.53
MATR3-220ENST00000512876 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
MATR3-220ENST00000512876 KRTAP20-2Q3LI61 65 aa5.49□□□□□ -1.53
MATR3-220ENST00000512876 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
MATR3-220ENST00000512876 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
MATR3-220ENST00000512876 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
MATR3-220ENST00000512876 TMEM258P61165 79 aa5.44□□□□□ -1.54
MATR3-220ENST00000512876 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
MATR3-220ENST00000512876 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
MATR3-220ENST00000512876 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
MATR3-220ENST00000512876 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
MATR3-220ENST00000512876 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
MATR3-220ENST00000512876 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
MATR3-220ENST00000512876 K7ERS5 55 aa5.27□□□□□ -1.57
MATR3-220ENST00000512876 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
MATR3-220ENST00000512876 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
MATR3-220ENST00000512876 PSPHP1O15172 72 aa5.17□□□□□ -1.58
MATR3-220ENST00000512876 V9GYY9 64 aa5.16□□□□□ -1.58
MATR3-220ENST00000512876 Q1T7F1 81 aa5.14□□□□□ -1.59
MATR3-220ENST00000512876 MT1AP04731 61 aa5.09□□□□□ -1.59
MATR3-220ENST00000512876 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.59
MATR3-220ENST00000512876 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
MATR3-220ENST00000512876 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
MATR3-220ENST00000512876 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
MATR3-220ENST00000512876 A6NED7 52 aa4.97□□□□□ -1.61
MATR3-220ENST00000512876 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
MATR3-220ENST00000512876 ROMO1P60602 79 aa4.92□□□□□ -1.62
MATR3-220ENST00000512876 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
MATR3-220ENST00000512876 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
MATR3-220ENST00000512876 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
MATR3-220ENST00000512876 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
MATR3-220ENST00000512876 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
MATR3-220ENST00000512876 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
MATR3-220ENST00000512876 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
MATR3-220ENST00000512876 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
MATR3-220ENST00000512876 MT3P25713 68 aa4.63□□□□□ -1.67
MATR3-220ENST00000512876 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
MATR3-220ENST00000512876 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
MATR3-220ENST00000512876 PCP4P48539 62 aa4.38□□□□□ -1.71
MATR3-220ENST00000512876 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
MATR3-220ENST00000512876 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
MATR3-220ENST00000512876 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
MATR3-220ENST00000512876 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
MATR3-220ENST00000512876 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
MATR3-220ENST00000512876 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
MATR3-220ENST00000512876 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
MATR3-220ENST00000512876 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
MATR3-220ENST00000512876 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
MATR3-220ENST00000512876 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
MATR3-220ENST00000512876 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
MATR3-220ENST00000512876 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
MATR3-220ENST00000512876 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
MATR3-220ENST00000512876 H3BS24 57 aa3.42□□□□□ -1.86
MATR3-220ENST00000512876 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
MATR3-220ENST00000512876 SVIPQ8NHG7 77 aa3.33□□□□□ -1.88
MATR3-220ENST00000512876 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
MATR3-220ENST00000512876 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
MATR3-220ENST00000512876 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
MATR3-220ENST00000512876 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
MATR3-220ENST00000512876 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
MATR3-220ENST00000512876 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
MATR3-220ENST00000512876 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
MATR3-220ENST00000512876 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
MATR3-220ENST00000512876 PRM1P04553 51 aa2.5□□□□□ -2.01
MATR3-220ENST00000512876 NDUFAF8A1L188 74 aa2.27□□□□□ -2.05
MATR3-220ENST00000512876 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
MATR3-220ENST00000512876 INE1O15225 51 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 76.6 ms