RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 KRTAP12-3P60328 96 aa6□□□□□ -1.45
HMGCS1-206ENST00000511774 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
HMGCS1-206ENST00000511774 TNP1P09430 55 aa5.96□□□□□ -1.46
HMGCS1-206ENST00000511774 KRTAP5-2Q701N4 177 aa5.96□□□□□ -1.46
HMGCS1-206ENST00000511774 SMIM20Q8N5G0 67 aa5.95□□□□□ -1.46
HMGCS1-206ENST00000511774 SNURFQ9Y675 71 aa5.92□□□□□ -1.46
HMGCS1-206ENST00000511774 A0A1B0GU33 70 aa5.9□□□□□ -1.46
HMGCS1-206ENST00000511774 PCP4L1A6NKN8 68 aa5.9□□□□□ -1.46
HMGCS1-206ENST00000511774 SPANXA2-OT1Q8N9U9 137 aa5.89□□□□□ -1.47
HMGCS1-206ENST00000511774 J3QR89 54 aa5.83□□□□□ -1.48
HMGCS1-206ENST00000511774 A8MU10 97 aa5.81□□□□□ -1.48
HMGCS1-206ENST00000511774 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
HMGCS1-206ENST00000511774 COA5Q86WW8 74 aa5.8□□□□□ -1.48
HMGCS1-206ENST00000511774 SMIM26A0A096LP01 95 aa5.78□□□□□ -1.48
HMGCS1-206ENST00000511774 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
HMGCS1-206ENST00000511774 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
HMGCS1-206ENST00000511774 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
HMGCS1-206ENST00000511774 MT1AP04731 61 aa5.66□□□□□ -1.5
HMGCS1-206ENST00000511774 KRTAP6-2Q3LI66 62 aa5.59□□□□□ -1.51
HMGCS1-206ENST00000511774 A0A1B0GV90 55 aa5.55□□□□□ -1.52
HMGCS1-206ENST00000511774 SERP2Q8N6R1 65 aa5.54□□□□□ -1.52
HMGCS1-206ENST00000511774 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
HMGCS1-206ENST00000511774 A0A1B0GU69 56 aa5.49□□□□□ -1.53
HMGCS1-206ENST00000511774 KRTAP5-1Q6L8H4 278 aa5.49□□□□□ -1.53
HMGCS1-206ENST00000511774 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
HMGCS1-206ENST00000511774 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
HMGCS1-206ENST00000511774 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
HMGCS1-206ENST00000511774 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
HMGCS1-206ENST00000511774 PRR15LQ9BU68 103 aa5.25□□□□□ -1.57
HMGCS1-206ENST00000511774 K7ERU9 68 aa5.23□□□□□ -1.57
HMGCS1-206ENST00000511774 H7BZZ5 65 aa5.19□□□□□ -1.58
HMGCS1-206ENST00000511774 MT3P25713 68 aa5.16□□□□□ -1.58
HMGCS1-206ENST00000511774 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
HMGCS1-206ENST00000511774 COX7CP15954 63 aa5.03□□□□□ -1.6
HMGCS1-206ENST00000511774 UQCR11O14957 56 aa4.99□□□□□ -1.61
HMGCS1-206ENST00000511774 K7ERS5 55 aa4.97□□□□□ -1.61
HMGCS1-206ENST00000511774 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
HMGCS1-206ENST00000511774 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
HMGCS1-206ENST00000511774 KRTAP4-2Q9BYR5 136 aa4.81□□□□□ -1.64
HMGCS1-206ENST00000511774 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
HMGCS1-206ENST00000511774 ATP5EP56381 51 aaPredicted RBP4.75□□□□□ -1.65
HMGCS1-206ENST00000511774 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
HMGCS1-206ENST00000511774 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
HMGCS1-206ENST00000511774 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
HMGCS1-206ENST00000511774 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
HMGCS1-206ENST00000511774 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
HMGCS1-206ENST00000511774 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
HMGCS1-206ENST00000511774 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
HMGCS1-206ENST00000511774 Q1T7F1 81 aa4.39□□□□□ -1.71
HMGCS1-206ENST00000511774 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
HMGCS1-206ENST00000511774 ROMO1P60602 79 aa4.35□□□□□ -1.71
HMGCS1-206ENST00000511774 V9GYY9 64 aa4.32□□□□□ -1.72
HMGCS1-206ENST00000511774 TMEM258P61165 79 aa4.29□□□□□ -1.72
HMGCS1-206ENST00000511774 PSPHP1O15172 72 aa4.28□□□□□ -1.72
HMGCS1-206ENST00000511774 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
HMGCS1-206ENST00000511774 PHGR1C9JFL3 82 aa4.2□□□□□ -1.74
HMGCS1-206ENST00000511774 A6NED7 52 aa4.13□□□□□ -1.75
HMGCS1-206ENST00000511774 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
HMGCS1-206ENST00000511774 PCP4P48539 62 aa4.06□□□□□ -1.76
HMGCS1-206ENST00000511774 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
HMGCS1-206ENST00000511774 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
HMGCS1-206ENST00000511774 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
HMGCS1-206ENST00000511774 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
HMGCS1-206ENST00000511774 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
HMGCS1-206ENST00000511774 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
HMGCS1-206ENST00000511774 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
HMGCS1-206ENST00000511774 H3BS24 57 aa3.31□□□□□ -1.88
HMGCS1-206ENST00000511774 BRK1Q8WUW1 75 aa3.17□□□□□ -1.9
HMGCS1-206ENST00000511774 KRTAP21-1Q3LI58 79 aa3.16□□□□□ -1.9
HMGCS1-206ENST00000511774 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
HMGCS1-206ENST00000511774 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
HMGCS1-206ENST00000511774 PRAC1Q96KF2 57 aa2.78□□□□□ -1.96
HMGCS1-206ENST00000511774 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
HMGCS1-206ENST00000511774 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
HMGCS1-206ENST00000511774 NDUFAF8A1L188 74 aa2.36□□□□□ -2.03
HMGCS1-206ENST00000511774 PRM1P04553 51 aa2.2□□□□□ -2.06
HMGCS1-206ENST00000511774 A0A0A0MQY5 61 aa2.19□□□□□ -2.06
HMGCS1-206ENST00000511774 INE1O15225 51 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms