RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 SPRR2DP22532 72 aa4.73□□□□□ -1.65
PTCD2-209ENST00000511752 V9GYY9 64 aa4.72□□□□□ -1.65
PTCD2-209ENST00000511752 TNP1P09430 55 aa4.67□□□□□ -1.66
PTCD2-209ENST00000511752 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
PTCD2-209ENST00000511752 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
PTCD2-209ENST00000511752 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
PTCD2-209ENST00000511752 Q1T7F1 81 aa4.65□□□□□ -1.67
PTCD2-209ENST00000511752 PSPHP1O15172 72 aa4.63□□□□□ -1.67
PTCD2-209ENST00000511752 MT1EP04732 61 aa4.63□□□□□ -1.67
PTCD2-209ENST00000511752 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
PTCD2-209ENST00000511752 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
PTCD2-209ENST00000511752 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
PTCD2-209ENST00000511752 K7ERS5 55 aa4.59□□□□□ -1.67
PTCD2-209ENST00000511752 PCP4P48539 62 aa4.58□□□□□ -1.68
PTCD2-209ENST00000511752 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
PTCD2-209ENST00000511752 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
PTCD2-209ENST00000511752 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
PTCD2-209ENST00000511752 A6NED7 52 aa4.51□□□□□ -1.69
PTCD2-209ENST00000511752 MT1GP13640 62 aa4.49□□□□□ -1.69
PTCD2-209ENST00000511752 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
PTCD2-209ENST00000511752 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
PTCD2-209ENST00000511752 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
PTCD2-209ENST00000511752 MT1LQ93083 61 aa4.45□□□□□ -1.7
PTCD2-209ENST00000511752 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
PTCD2-209ENST00000511752 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
PTCD2-209ENST00000511752 MT1MQ8N339 61 aa4.4□□□□□ -1.71
PTCD2-209ENST00000511752 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
PTCD2-209ENST00000511752 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
PTCD2-209ENST00000511752 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
PTCD2-209ENST00000511752 ROMO1P60602 79 aa4.26□□□□□ -1.73
PTCD2-209ENST00000511752 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
PTCD2-209ENST00000511752 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
PTCD2-209ENST00000511752 MT4P47944 62 aa4.11□□□□□ -1.75
PTCD2-209ENST00000511752 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
PTCD2-209ENST00000511752 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
PTCD2-209ENST00000511752 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
PTCD2-209ENST00000511752 BRK1Q8WUW1 75 aa4□□□□□ -1.77
PTCD2-209ENST00000511752 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
PTCD2-209ENST00000511752 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
PTCD2-209ENST00000511752 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
PTCD2-209ENST00000511752 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
PTCD2-209ENST00000511752 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
PTCD2-209ENST00000511752 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
PTCD2-209ENST00000511752 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
PTCD2-209ENST00000511752 MT1AP04731 61 aa3.8□□□□□ -1.8
PTCD2-209ENST00000511752 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
PTCD2-209ENST00000511752 MT3P25713 68 aa3.77□□□□□ -1.81
PTCD2-209ENST00000511752 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
PTCD2-209ENST00000511752 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
PTCD2-209ENST00000511752 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
PTCD2-209ENST00000511752 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
PTCD2-209ENST00000511752 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
PTCD2-209ENST00000511752 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
PTCD2-209ENST00000511752 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
PTCD2-209ENST00000511752 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
PTCD2-209ENST00000511752 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
PTCD2-209ENST00000511752 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
PTCD2-209ENST00000511752 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
PTCD2-209ENST00000511752 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
PTCD2-209ENST00000511752 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
PTCD2-209ENST00000511752 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
PTCD2-209ENST00000511752 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
PTCD2-209ENST00000511752 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
PTCD2-209ENST00000511752 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
PTCD2-209ENST00000511752 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
PTCD2-209ENST00000511752 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
PTCD2-209ENST00000511752 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
PTCD2-209ENST00000511752 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
PTCD2-209ENST00000511752 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
PTCD2-209ENST00000511752 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
PTCD2-209ENST00000511752 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
PTCD2-209ENST00000511752 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
PTCD2-209ENST00000511752 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
PTCD2-209ENST00000511752 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
PTCD2-209ENST00000511752 PRM1P04553 51 aa2.17□□□□□ -2.06
PTCD2-209ENST00000511752 INE1O15225 51 aa2.06□□□□□ -2.08
PTCD2-209ENST00000511752 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PTCD2-209ENST00000511752 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 109.6 ms