RNA–Protein interactions for RNA: ENST00000511238.5

TBC1D1-217, Transcript of TBC1 domain family member 1, humanhuman

TSL 3

Gene TBC1D1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-217ENST00000511238 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
TBC1D1-217ENST00000511238 M0QZ58 72 aa2.41□□□□□ -2.02
TBC1D1-217ENST00000511238 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
TBC1D1-217ENST00000511238 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
TBC1D1-217ENST00000511238 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
TBC1D1-217ENST00000511238 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
TBC1D1-217ENST00000511238 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
TBC1D1-217ENST00000511238 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.03
TBC1D1-217ENST00000511238 MT2AP02795 61 aa2.33□□□□□ -2.04
TBC1D1-217ENST00000511238 MT1FP04733 61 aa2.3□□□□□ -2.04
TBC1D1-217ENST00000511238 KRTAP10-10P60014 251 aa2.3□□□□□ -2.04
TBC1D1-217ENST00000511238 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
TBC1D1-217ENST00000511238 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
TBC1D1-217ENST00000511238 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
TBC1D1-217ENST00000511238 USH2AO75445 5202 aa2.24□□□□□ -2.05
TBC1D1-217ENST00000511238 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
TBC1D1-217ENST00000511238 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
TBC1D1-217ENST00000511238 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
TBC1D1-217ENST00000511238 TNP1P09430 55 aa2.16□□□□□ -2.06
TBC1D1-217ENST00000511238 KRTAP19-6Q3LI70 58 aa2.16□□□□□ -2.06
TBC1D1-217ENST00000511238 SPRR2GQ9BYE4 73 aa2.16□□□□□ -2.06
TBC1D1-217ENST00000511238 KRTAP19-8Q3LI54 63 aa2.14□□□□□ -2.07
TBC1D1-217ENST00000511238 MACF1Q9UPN3 7388 aaKnown RBP2.13□□□□□ -2.07
TBC1D1-217ENST00000511238 MT1BP07438 61 aa2.12□□□□□ -2.07
TBC1D1-217ENST00000511238 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
TBC1D1-217ENST00000511238 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
TBC1D1-217ENST00000511238 SYNE2Q8WXH0 6885 aaKnown RBP2.08□□□□□ -2.08
TBC1D1-217ENST00000511238 KRTAP4-3Q9BYR4 195 aa2.08□□□□□ -2.08
TBC1D1-217ENST00000511238 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
TBC1D1-217ENST00000511238 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
TBC1D1-217ENST00000511238 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
TBC1D1-217ENST00000511238 MT1XP80297 61 aa2□□□□□ -2.09
TBC1D1-217ENST00000511238 NEBP20929 6669 aa1.97□□□□□ -2.09
TBC1D1-217ENST00000511238 KMT2DO14686 5537 aa1.95□□□□□ -2.1
TBC1D1-217ENST00000511238 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
TBC1D1-217ENST00000511238 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
TBC1D1-217ENST00000511238 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
TBC1D1-217ENST00000511238 MUC12Q9UKN1 5478 aa1.9□□□□□ -2.11
TBC1D1-217ENST00000511238 SPRR2FQ96RM1 72 aa1.9□□□□□ -2.11
TBC1D1-217ENST00000511238 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
TBC1D1-217ENST00000511238 SPRR2EP22531 72 aa1.86□□□□□ -2.11
TBC1D1-217ENST00000511238 SPRR2BP35325 72 aa1.86□□□□□ -2.11
TBC1D1-217ENST00000511238 SPRR2AP35326 72 aa1.86□□□□□ -2.11
TBC1D1-217ENST00000511238 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
TBC1D1-217ENST00000511238 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
TBC1D1-217ENST00000511238 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
TBC1D1-217ENST00000511238 SPRR2DP22532 72 aa1.8□□□□□ -2.12
TBC1D1-217ENST00000511238 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
TBC1D1-217ENST00000511238 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
TBC1D1-217ENST00000511238 MT1EP04732 61 aa1.78□□□□□ -2.12
TBC1D1-217ENST00000511238 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
TBC1D1-217ENST00000511238 KRTAP19-5Q3LI72 72 aa1.76□□□□□ -2.13
TBC1D1-217ENST00000511238 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
TBC1D1-217ENST00000511238 MT1GP13640 62 aa1.72□□□□□ -2.13
TBC1D1-217ENST00000511238 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
TBC1D1-217ENST00000511238 MT1LQ93083 61 aa1.71□□□□□ -2.14
TBC1D1-217ENST00000511238 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
TBC1D1-217ENST00000511238 MT1MQ8N339 61 aa1.68□□□□□ -2.14
TBC1D1-217ENST00000511238 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
TBC1D1-217ENST00000511238 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
TBC1D1-217ENST00000511238 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
TBC1D1-217ENST00000511238 PRM1P04553 51 aa1.57□□□□□ -2.16
TBC1D1-217ENST00000511238 MT4P47944 62 aa1.56□□□□□ -2.16
TBC1D1-217ENST00000511238 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
TBC1D1-217ENST00000511238 MT1AP04731 61 aa1.49□□□□□ -2.17
TBC1D1-217ENST00000511238 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
TBC1D1-217ENST00000511238 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
TBC1D1-217ENST00000511238 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
TBC1D1-217ENST00000511238 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
TBC1D1-217ENST00000511238 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
TBC1D1-217ENST00000511238 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
TBC1D1-217ENST00000511238 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
TBC1D1-217ENST00000511238 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
TBC1D1-217ENST00000511238 MUC5ACP98088 5654 aa1.28□□□□□ -2.2
TBC1D1-217ENST00000511238 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
TBC1D1-217ENST00000511238 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
TBC1D1-217ENST00000511238 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
TBC1D1-217ENST00000511238 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 84.3 ms