RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 COX7CP15954 63 aa3.32□□□□□ -1.88
SNF8-207ENST00000509995 CCDC179H3BU77 68 aa3.31□□□□□ -1.88
SNF8-207ENST00000509995 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
SNF8-207ENST00000509995 H3BS24 57 aa3.29□□□□□ -1.88
SNF8-207ENST00000509995 TMEM258P61165 79 aa3.29□□□□□ -1.88
SNF8-207ENST00000509995 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
SNF8-207ENST00000509995 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
SNF8-207ENST00000509995 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
SNF8-207ENST00000509995 TRAV7A0A075B6U4 112 aa3.25□□□□□ -1.89
SNF8-207ENST00000509995 ATP5EP56381 51 aaPredicted RBP3.25□□□□□ -1.89
SNF8-207ENST00000509995 RPS28P62857 69 aaKnown RBP3.23□□□□□ -1.89
SNF8-207ENST00000509995 DMAC1Q96GE9 116 aa3.23□□□□□ -1.89
SNF8-207ENST00000509995 LINC00208Q96KT6 92 aa3.2□□□□□ -1.9
SNF8-207ENST00000509995 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
SNF8-207ENST00000509995 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
SNF8-207ENST00000509995 SERP1Q9Y6X1 66 aa3.17□□□□□ -1.9
SNF8-207ENST00000509995 H7BZZ5 65 aa3.15□□□□□ -1.91
SNF8-207ENST00000509995 MT1AP04731 61 aa3.15□□□□□ -1.91
SNF8-207ENST00000509995 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
SNF8-207ENST00000509995 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
SNF8-207ENST00000509995 OCR1Q9BZK8 76 aa3.14□□□□□ -1.91
SNF8-207ENST00000509995 H3BPC8 53 aa3.13□□□□□ -1.91
SNF8-207ENST00000509995 MP68P56378 58 aa3.13□□□□□ -1.91
SNF8-207ENST00000509995 SNURFQ9Y675 71 aa3.12□□□□□ -1.91
SNF8-207ENST00000509995 SMIM26A0A096LP01 95 aa3.11□□□□□ -1.91
SNF8-207ENST00000509995 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
SNF8-207ENST00000509995 SPANXA2-OT1Q8N9U9 137 aa3.06□□□□□ -1.92
SNF8-207ENST00000509995 V9GYY9 64 aa3.06□□□□□ -1.92
SNF8-207ENST00000509995 SPINT4Q6UDR6 99 aa3.05□□□□□ -1.92
SNF8-207ENST00000509995 TNP1P09430 55 aa3.04□□□□□ -1.92
SNF8-207ENST00000509995 PRO0628Q9UI54 55 aa3□□□□□ -1.93
SNF8-207ENST00000509995 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
SNF8-207ENST00000509995 Q1T7F1 81 aa2.99□□□□□ -1.93
SNF8-207ENST00000509995 ACYP2P14621 99 aa2.97□□□□□ -1.93
SNF8-207ENST00000509995 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
SNF8-207ENST00000509995 BRK1Q8WUW1 75 aa2.95□□□□□ -1.94
SNF8-207ENST00000509995 CHKB-CPT1BH3BT56 60 aa2.93□□□□□ -1.94
SNF8-207ENST00000509995 COA5Q86WW8 74 aa2.92□□□□□ -1.94
SNF8-207ENST00000509995 MT3P25713 68 aa2.91□□□□□ -1.94
SNF8-207ENST00000509995 KRTAP15-1Q3LI76 137 aa2.91□□□□□ -1.94
SNF8-207ENST00000509995 SPATA8Q6RVD6 105 aa2.9□□□□□ -1.95
SNF8-207ENST00000509995 PRR15LQ9BU68 103 aa2.89□□□□□ -1.95
SNF8-207ENST00000509995 PSPHP1O15172 72 aa2.88□□□□□ -1.95
SNF8-207ENST00000509995 LINC01558Q9Y6Z2 57 aa2.87□□□□□ -1.95
SNF8-207ENST00000509995 A6NED7 52 aa2.86□□□□□ -1.95
SNF8-207ENST00000509995 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
SNF8-207ENST00000509995 CDC42SE1Q9NRR8 79 aa2.84□□□□□ -1.95
SNF8-207ENST00000509995 KRTAP25-1Q3LHN0 102 aa2.83□□□□□ -1.96
SNF8-207ENST00000509995 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
SNF8-207ENST00000509995 A0A1B0GU69 56 aa2.8□□□□□ -1.96
SNF8-207ENST00000509995 SEC61GP60059 68 aa2.8□□□□□ -1.96
SNF8-207ENST00000509995 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
SNF8-207ENST00000509995 UQCR11O14957 56 aa2.77□□□□□ -1.97
SNF8-207ENST00000509995 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
SNF8-207ENST00000509995 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
SNF8-207ENST00000509995 MIR22HGQ0VDD5 57 aa2.73□□□□□ -1.97
SNF8-207ENST00000509995 A0A1B0GU33 70 aa2.72□□□□□ -1.97
SNF8-207ENST00000509995 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
SNF8-207ENST00000509995 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
SNF8-207ENST00000509995 K7ERS5 55 aa2.68□□□□□ -1.98
SNF8-207ENST00000509995 A8MU10 97 aa2.66□□□□□ -1.98
SNF8-207ENST00000509995 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
SNF8-207ENST00000509995 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
SNF8-207ENST00000509995 LCE1FQ5T754 118 aa2.57□□□□□ -2
SNF8-207ENST00000509995 KRTAP23-1A1A580 65 aa2.52□□□□□ -2.01
SNF8-207ENST00000509995 PRAC1Q96KF2 57 aa2.52□□□□□ -2.01
SNF8-207ENST00000509995 ROMO1P60602 79 aa2.5□□□□□ -2.01
SNF8-207ENST00000509995 A0A0A0MQY5 61 aa2.33□□□□□ -2.04
SNF8-207ENST00000509995 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
SNF8-207ENST00000509995 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
SNF8-207ENST00000509995 NDUFAF8A1L188 74 aa2.15□□□□□ -2.07
SNF8-207ENST00000509995 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
SNF8-207ENST00000509995 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
SNF8-207ENST00000509995 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
SNF8-207ENST00000509995 INE1O15225 51 aa1.86□□□□□ -2.11
SNF8-207ENST00000509995 LCE3EQ5T5B0 92 aa1.63□□□□□ -2.15
SNF8-207ENST00000509995 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
SNF8-207ENST00000509995 PRM1P04553 51 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 81.4 ms