RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 TMEM258P61165 79 aa6□□□□□ -1.45
PDLIM5-212ENST00000509333 MT1EP04732 61 aa5.99□□□□□ -1.45
PDLIM5-212ENST00000509333 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
PDLIM5-212ENST00000509333 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
PDLIM5-212ENST00000509333 KRTAP19-3Q7Z4W3 81 aa5.92□□□□□ -1.46
PDLIM5-212ENST00000509333 PCP4P48539 62 aa5.89□□□□□ -1.47
PDLIM5-212ENST00000509333 TNP1P09430 55 aa5.86□□□□□ -1.47
PDLIM5-212ENST00000509333 UQCR11O14957 56 aa5.85□□□□□ -1.47
PDLIM5-212ENST00000509333 MT1GP13640 62 aa5.83□□□□□ -1.48
PDLIM5-212ENST00000509333 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
PDLIM5-212ENST00000509333 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
PDLIM5-212ENST00000509333 MT1LQ93083 61 aa5.75□□□□□ -1.49
PDLIM5-212ENST00000509333 MIR22HGQ0VDD5 57 aa5.73□□□□□ -1.49
PDLIM5-212ENST00000509333 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
PDLIM5-212ENST00000509333 MT1MQ8N339 61 aa5.7□□□□□ -1.5
PDLIM5-212ENST00000509333 Q1T7F1 81 aa5.69□□□□□ -1.5
PDLIM5-212ENST00000509333 V9GYY9 64 aa5.69□□□□□ -1.5
PDLIM5-212ENST00000509333 PSPHP1O15172 72 aa5.66□□□□□ -1.5
PDLIM5-212ENST00000509333 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
PDLIM5-212ENST00000509333 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
PDLIM5-212ENST00000509333 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
PDLIM5-212ENST00000509333 K7ERS5 55 aa5.56□□□□□ -1.52
PDLIM5-212ENST00000509333 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
PDLIM5-212ENST00000509333 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
PDLIM5-212ENST00000509333 A6NED7 52 aa5.44□□□□□ -1.54
PDLIM5-212ENST00000509333 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
PDLIM5-212ENST00000509333 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
PDLIM5-212ENST00000509333 MT4P47944 62 aa5.38□□□□□ -1.55
PDLIM5-212ENST00000509333 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
PDLIM5-212ENST00000509333 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
PDLIM5-212ENST00000509333 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
PDLIM5-212ENST00000509333 ROMO1P60602 79 aa5.25□□□□□ -1.57
PDLIM5-212ENST00000509333 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-212ENST00000509333 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
PDLIM5-212ENST00000509333 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-212ENST00000509333 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
PDLIM5-212ENST00000509333 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
PDLIM5-212ENST00000509333 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
PDLIM5-212ENST00000509333 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
PDLIM5-212ENST00000509333 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
PDLIM5-212ENST00000509333 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
PDLIM5-212ENST00000509333 MT1AP04731 61 aa4.88□□□□□ -1.63
PDLIM5-212ENST00000509333 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
PDLIM5-212ENST00000509333 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-212ENST00000509333 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
PDLIM5-212ENST00000509333 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
PDLIM5-212ENST00000509333 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
PDLIM5-212ENST00000509333 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
PDLIM5-212ENST00000509333 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
PDLIM5-212ENST00000509333 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
PDLIM5-212ENST00000509333 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
PDLIM5-212ENST00000509333 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
PDLIM5-212ENST00000509333 KRTAP5-8O75690 187 aa4.48□□□□□ -1.69
PDLIM5-212ENST00000509333 MT3P25713 68 aa4.48□□□□□ -1.69
PDLIM5-212ENST00000509333 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
PDLIM5-212ENST00000509333 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
PDLIM5-212ENST00000509333 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
PDLIM5-212ENST00000509333 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
PDLIM5-212ENST00000509333 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
PDLIM5-212ENST00000509333 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-212ENST00000509333 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-212ENST00000509333 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
PDLIM5-212ENST00000509333 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
PDLIM5-212ENST00000509333 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
PDLIM5-212ENST00000509333 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
PDLIM5-212ENST00000509333 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
PDLIM5-212ENST00000509333 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
PDLIM5-212ENST00000509333 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
PDLIM5-212ENST00000509333 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
PDLIM5-212ENST00000509333 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
PDLIM5-212ENST00000509333 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
PDLIM5-212ENST00000509333 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
PDLIM5-212ENST00000509333 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
PDLIM5-212ENST00000509333 INE1O15225 51 aa2.9□□□□□ -1.95
PDLIM5-212ENST00000509333 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
PDLIM5-212ENST00000509333 PRM1P04553 51 aa2.68□□□□□ -1.98
PDLIM5-212ENST00000509333 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
PDLIM5-212ENST00000509333 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms