RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 A8MU10 97 aa6.93□□□□□ -1.3
UBE3D-207ENST00000509102 MT1EP04732 61 aa6.93□□□□□ -1.3
UBE3D-207ENST00000509102 KRTAP19-3Q7Z4W3 81 aa6.9□□□□□ -1.3
UBE3D-207ENST00000509102 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
UBE3D-207ENST00000509102 TNP1P09430 55 aa6.82□□□□□ -1.32
UBE3D-207ENST00000509102 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
UBE3D-207ENST00000509102 TMEM258P61165 79 aa6.8□□□□□ -1.32
UBE3D-207ENST00000509102 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
UBE3D-207ENST00000509102 MT1GP13640 62 aa6.76□□□□□ -1.33
UBE3D-207ENST00000509102 DSTQ03001 7570 aaKnown RBP6.75□□□□□ -1.33
UBE3D-207ENST00000509102 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
UBE3D-207ENST00000509102 UQCR11O14957 56 aa6.72□□□□□ -1.33
UBE3D-207ENST00000509102 LCE3AQ5TA76 89 aa6.69□□□□□ -1.34
UBE3D-207ENST00000509102 MT1LQ93083 61 aa6.63□□□□□ -1.35
UBE3D-207ENST00000509102 MT1MQ8N339 61 aa6.6□□□□□ -1.35
UBE3D-207ENST00000509102 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
UBE3D-207ENST00000509102 K7ERS5 55 aa6.53□□□□□ -1.36
UBE3D-207ENST00000509102 V9GYY9 64 aa6.5□□□□□ -1.37
UBE3D-207ENST00000509102 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
UBE3D-207ENST00000509102 KRTAP25-1Q3LHN0 102 aa6.43□□□□□ -1.38
UBE3D-207ENST00000509102 PSPHP1O15172 72 aa6.39□□□□□ -1.39
UBE3D-207ENST00000509102 KRTAP4-3Q9BYR4 195 aa6.39□□□□□ -1.39
UBE3D-207ENST00000509102 MT4P47944 62 aa6.36□□□□□ -1.39
UBE3D-207ENST00000509102 Q1T7F1 81 aa6.36□□□□□ -1.39
UBE3D-207ENST00000509102 GPR98Q8WXG9 6306 aa6.32□□□□□ -1.4
UBE3D-207ENST00000509102 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
UBE3D-207ENST00000509102 KRTAP5-4Q6L8H1 288 aa6.26□□□□□ -1.41
UBE3D-207ENST00000509102 A6NED7 52 aa6.23□□□□□ -1.41
UBE3D-207ENST00000509102 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
UBE3D-207ENST00000509102 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.05□□□□□ -1.44
UBE3D-207ENST00000509102 RPS28P62857 69 aaKnown RBP6.02□□□□□ -1.45
UBE3D-207ENST00000509102 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
UBE3D-207ENST00000509102 AHNAK2Q8IVF2 5795 aa6.01□□□□□ -1.45
UBE3D-207ENST00000509102 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
UBE3D-207ENST00000509102 ROMO1P60602 79 aa5.98□□□□□ -1.45
UBE3D-207ENST00000509102 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
UBE3D-207ENST00000509102 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
UBE3D-207ENST00000509102 KRTAP20-2Q3LI61 65 aa5.93□□□□□ -1.46
UBE3D-207ENST00000509102 KRTAP5-10Q6L8G5 202 aa5.92□□□□□ -1.46
UBE3D-207ENST00000509102 KRTAP5-11Q6L8G4 156 aa5.91□□□□□ -1.46
UBE3D-207ENST00000509102 PCP4P48539 62 aa5.9□□□□□ -1.46
UBE3D-207ENST00000509102 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
UBE3D-207ENST00000509102 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
UBE3D-207ENST00000509102 MT3P25713 68 aa5.69□□□□□ -1.5
UBE3D-207ENST00000509102 MT1AP04731 61 aa5.66□□□□□ -1.5
UBE3D-207ENST00000509102 LCE1EQ5T753 118 aa5.66□□□□□ -1.5
UBE3D-207ENST00000509102 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
UBE3D-207ENST00000509102 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
UBE3D-207ENST00000509102 KRTAP5-2Q701N4 177 aa5.48□□□□□ -1.53
UBE3D-207ENST00000509102 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
UBE3D-207ENST00000509102 BRK1Q8WUW1 75 aa5.33□□□□□ -1.56
UBE3D-207ENST00000509102 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
UBE3D-207ENST00000509102 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
UBE3D-207ENST00000509102 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
UBE3D-207ENST00000509102 KRTAP4-4Q9BYR3 166 aa5.04□□□□□ -1.6
UBE3D-207ENST00000509102 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
UBE3D-207ENST00000509102 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
UBE3D-207ENST00000509102 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.61
UBE3D-207ENST00000509102 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
UBE3D-207ENST00000509102 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
UBE3D-207ENST00000509102 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
UBE3D-207ENST00000509102 LCE1FQ5T754 118 aa4.76□□□□□ -1.65
UBE3D-207ENST00000509102 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
UBE3D-207ENST00000509102 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
UBE3D-207ENST00000509102 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
UBE3D-207ENST00000509102 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
UBE3D-207ENST00000509102 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
UBE3D-207ENST00000509102 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
UBE3D-207ENST00000509102 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
UBE3D-207ENST00000509102 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
UBE3D-207ENST00000509102 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
UBE3D-207ENST00000509102 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
UBE3D-207ENST00000509102 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
UBE3D-207ENST00000509102 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
UBE3D-207ENST00000509102 PRM1P04553 51 aa3.04□□□□□ -1.92
UBE3D-207ENST00000509102 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
UBE3D-207ENST00000509102 INE1O15225 51 aa2.64□□□□□ -1.99
UBE3D-207ENST00000509102 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 128.3 ms