RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 KRTAP4-6Q9BYQ5 205 aa6.1□□□□□ -1.43
CLDND1-219ENST00000508659 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.44
CLDND1-219ENST00000508659 MT1GP13640 62 aa6.08□□□□□ -1.44
CLDND1-219ENST00000508659 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
CLDND1-219ENST00000508659 MT1LQ93083 61 aa6.05□□□□□ -1.44
CLDND1-219ENST00000508659 A6NED7 52 aa6.02□□□□□ -1.45
CLDND1-219ENST00000508659 PCP4P48539 62 aa6.02□□□□□ -1.45
CLDND1-219ENST00000508659 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
CLDND1-219ENST00000508659 MT1MQ8N339 61 aa5.99□□□□□ -1.45
CLDND1-219ENST00000508659 H3BS24 57 aa5.98□□□□□ -1.45
CLDND1-219ENST00000508659 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
CLDND1-219ENST00000508659 RPS28P62857 69 aaKnown RBP5.94□□□□□ -1.46
CLDND1-219ENST00000508659 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
CLDND1-219ENST00000508659 CDC42SE1Q9NRR8 79 aa5.81□□□□□ -1.48
CLDND1-219ENST00000508659 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
CLDND1-219ENST00000508659 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
CLDND1-219ENST00000508659 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
CLDND1-219ENST00000508659 LCE4AQ5TA78 99 aa5.71□□□□□ -1.5
CLDND1-219ENST00000508659 ROMO1P60602 79 aa5.7□□□□□ -1.5
CLDND1-219ENST00000508659 LCE1DQ5T752 114 aa5.67□□□□□ -1.5
CLDND1-219ENST00000508659 MT4P47944 62 aa5.65□□□□□ -1.5
CLDND1-219ENST00000508659 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
CLDND1-219ENST00000508659 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
CLDND1-219ENST00000508659 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
CLDND1-219ENST00000508659 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
CLDND1-219ENST00000508659 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
CLDND1-219ENST00000508659 GPR98Q8WXG9 6306 aa5.58□□□□□ -1.52
CLDND1-219ENST00000508659 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
CLDND1-219ENST00000508659 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
CLDND1-219ENST00000508659 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
CLDND1-219ENST00000508659 AHNAK2Q8IVF2 5795 aa5.32□□□□□ -1.56
CLDND1-219ENST00000508659 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
CLDND1-219ENST00000508659 BRK1Q8WUW1 75 aa5.31□□□□□ -1.56
CLDND1-219ENST00000508659 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
CLDND1-219ENST00000508659 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
CLDND1-219ENST00000508659 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
CLDND1-219ENST00000508659 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
CLDND1-219ENST00000508659 KRTAP5-10Q6L8G5 202 aa5.19□□□□□ -1.58
CLDND1-219ENST00000508659 MT1AP04731 61 aa5.15□□□□□ -1.59
CLDND1-219ENST00000508659 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
CLDND1-219ENST00000508659 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
CLDND1-219ENST00000508659 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
CLDND1-219ENST00000508659 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
CLDND1-219ENST00000508659 KRTAP5-7Q6L8G8 165 aa4.96□□□□□ -1.62
CLDND1-219ENST00000508659 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
CLDND1-219ENST00000508659 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
CLDND1-219ENST00000508659 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
CLDND1-219ENST00000508659 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
CLDND1-219ENST00000508659 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
CLDND1-219ENST00000508659 MT3P25713 68 aa4.71□□□□□ -1.66
CLDND1-219ENST00000508659 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
CLDND1-219ENST00000508659 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
CLDND1-219ENST00000508659 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
CLDND1-219ENST00000508659 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
CLDND1-219ENST00000508659 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
CLDND1-219ENST00000508659 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
CLDND1-219ENST00000508659 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
CLDND1-219ENST00000508659 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
CLDND1-219ENST00000508659 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
CLDND1-219ENST00000508659 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
CLDND1-219ENST00000508659 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
CLDND1-219ENST00000508659 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
CLDND1-219ENST00000508659 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
CLDND1-219ENST00000508659 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
CLDND1-219ENST00000508659 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
CLDND1-219ENST00000508659 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
CLDND1-219ENST00000508659 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
CLDND1-219ENST00000508659 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
CLDND1-219ENST00000508659 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
CLDND1-219ENST00000508659 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
CLDND1-219ENST00000508659 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
CLDND1-219ENST00000508659 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
CLDND1-219ENST00000508659 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CLDND1-219ENST00000508659 PRM1P04553 51 aa2.93□□□□□ -1.94
CLDND1-219ENST00000508659 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
CLDND1-219ENST00000508659 INE1O15225 51 aa2.68□□□□□ -1.98
CLDND1-219ENST00000508659 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
CLDND1-219ENST00000508659 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 90.5 ms