RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 H3BS24 57 aa8.55□□□□□ -1.04
SRPK1-210ENST00000508473 GPR98Q8WXG9 6306 aa8.54□□□□□ -1.04
SRPK1-210ENST00000508473 PSPHP1O15172 72 aa8.54□□□□□ -1.04
SRPK1-210ENST00000508473 MT1MQ8N339 61 aa8.54□□□□□ -1.04
SRPK1-210ENST00000508473 V9GYY9 64 aa8.51□□□□□ -1.05
SRPK1-210ENST00000508473 Q1T7F1 81 aa8.46□□□□□ -1.06
SRPK1-210ENST00000508473 KRTAP4-9Q9BYQ8 210 aa8.42□□□□□ -1.06
SRPK1-210ENST00000508473 K7ERS5 55 aa8.41□□□□□ -1.06
SRPK1-210ENST00000508473 KRTAP12-3P60328 96 aa8.39□□□□□ -1.07
SRPK1-210ENST00000508473 KRTAP4-3Q9BYR4 195 aa8.39□□□□□ -1.07
SRPK1-210ENST00000508473 KRTAP25-1Q3LHN0 102 aa8.34□□□□□ -1.07
SRPK1-210ENST00000508473 KRTAP4-7Q9BYR0 210 aa8.24□□□□□ -1.09
SRPK1-210ENST00000508473 A6NED7 52 aa8.23□□□□□ -1.09
SRPK1-210ENST00000508473 LCE1DQ5T752 114 aa8.18□□□□□ -1.1
SRPK1-210ENST00000508473 LCE4AQ5TA78 99 aa8.18□□□□□ -1.1
SRPK1-210ENST00000508473 MT4P47944 62 aa8.14□□□□□ -1.11
SRPK1-210ENST00000508473 PCP4P48539 62 aa8.1□□□□□ -1.11
SRPK1-210ENST00000508473 RPS28P62857 69 aaKnown RBP8.08□□□□□ -1.12
SRPK1-210ENST00000508473 KRTAP5-4Q6L8H1 288 aa8.04□□□□□ -1.12
SRPK1-210ENST00000508473 KRTAP23-1A1A580 65 aa7.99□□□□□ -1.13
SRPK1-210ENST00000508473 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
SRPK1-210ENST00000508473 HMCN1Q96RW7 5635 aa7.98□□□□□ -1.13
SRPK1-210ENST00000508473 KRTAP4-6Q9BYQ5 205 aa7.91□□□□□ -1.14
SRPK1-210ENST00000508473 ROMO1P60602 79 aa7.87□□□□□ -1.15
SRPK1-210ENST00000508473 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
SRPK1-210ENST00000508473 AHNAK2Q8IVF2 5795 aa7.82□□□□□ -1.16
SRPK1-210ENST00000508473 KRTAP19-4Q3LI73 84 aa7.81□□□□□ -1.16
SRPK1-210ENST00000508473 LOC100996750A0A140TA64 210 aa7.8□□□□□ -1.16
SRPK1-210ENST00000508473 KRTAP5-5Q701N2 237 aaPredicted RBP7.8□□□□□ -1.16
SRPK1-210ENST00000508473 KRTAP5-10Q6L8G5 202 aa7.77□□□□□ -1.17
SRPK1-210ENST00000508473 LCE3CQ5T5A8 94 aa7.73□□□□□ -1.17
SRPK1-210ENST00000508473 KRTAP20-2Q3LI61 65 aa7.61□□□□□ -1.19
SRPK1-210ENST00000508473 KRTAP12-4P60329 112 aa7.58□□□□□ -1.2
SRPK1-210ENST00000508473 SPRR5A0A1B0GTR4 108 aa7.55□□□□□ -1.2
SRPK1-210ENST00000508473 KRTAP5-7Q6L8G8 165 aa7.53□□□□□ -1.2
SRPK1-210ENST00000508473 KRTAP5-3Q6L8H2 238 aa7.5□□□□□ -1.21
SRPK1-210ENST00000508473 SYNE1Q8NF91 8797 aaKnown RBP7.48□□□□□ -1.21
SRPK1-210ENST00000508473 KRTAP9-6A8MVA2 160 aa7.31□□□□□ -1.24
SRPK1-210ENST00000508473 MT1AP04731 61 aa7.31□□□□□ -1.24
SRPK1-210ENST00000508473 KRTAP6-1Q3LI64 71 aa7.29□□□□□ -1.24
SRPK1-210ENST00000508473 BRK1Q8WUW1 75 aa7.17□□□□□ -1.26
SRPK1-210ENST00000508473 KRTAP5-2Q701N4 177 aa7.07□□□□□ -1.28
SRPK1-210ENST00000508473 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
SRPK1-210ENST00000508473 A0A0A0MQY5 61 aa6.96□□□□□ -1.3
SRPK1-210ENST00000508473 KRTAP6-2Q3LI66 62 aa6.94□□□□□ -1.3
SRPK1-210ENST00000508473 KRTAP4-11Q9BYQ6 195 aa6.91□□□□□ -1.3
SRPK1-210ENST00000508473 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
SRPK1-210ENST00000508473 KRTAP5-8O75690 187 aa6.68□□□□□ -1.34
SRPK1-210ENST00000508473 MT3P25713 68 aa6.68□□□□□ -1.34
SRPK1-210ENST00000508473 OBSCNQ5VST9 7968 aa6.55□□□□□ -1.36
SRPK1-210ENST00000508473 PRAC1Q96KF2 57 aa6.53□□□□□ -1.36
SRPK1-210ENST00000508473 AHNAKQ09666 5890 aaKnown RBP6.52□□□□□ -1.37
SRPK1-210ENST00000508473 MUC5ACP98088 5654 aa6.52□□□□□ -1.37
SRPK1-210ENST00000508473 MUC5BQ9HC84 5762 aaPredicted RBP6.48□□□□□ -1.37
SRPK1-210ENST00000508473 KRTAP9-9Q9BYP9 154 aa6.39□□□□□ -1.39
SRPK1-210ENST00000508473 KRTAP5-1Q6L8H4 278 aa6.33□□□□□ -1.4
SRPK1-210ENST00000508473 KRTAP4-12Q9BQ66 201 aa6.26□□□□□ -1.41
SRPK1-210ENST00000508473 PRO0628Q9UI54 55 aa6.23□□□□□ -1.41
SRPK1-210ENST00000508473 LCE1EQ5T753 118 aa6.07□□□□□ -1.44
SRPK1-210ENST00000508473 KTN1-AS1Q86SY8 53 aa5.96□□□□□ -1.46
SRPK1-210ENST00000508473 LCE1BQ5T7P3 118 aa5.8□□□□□ -1.48
SRPK1-210ENST00000508473 KRTAP4-2Q9BYR5 136 aa5.77□□□□□ -1.49
SRPK1-210ENST00000508473 LCE1CQ5T751 118 aa5.64□□□□□ -1.51
SRPK1-210ENST00000508473 LCE3DQ9BYE3 92 aa5.59□□□□□ -1.51
SRPK1-210ENST00000508473 LUZP6Q538Z0 58 aa5.44□□□□□ -1.54
SRPK1-210ENST00000508473 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
SRPK1-210ENST00000508473 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.13□□□□□ -1.59
SRPK1-210ENST00000508473 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
SRPK1-210ENST00000508473 KRTAP5-11Q6L8G4 156 aa5.1□□□□□ -1.59
SRPK1-210ENST00000508473 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
SRPK1-210ENST00000508473 KRTAP21-2Q3LI59 83 aa4.78□□□□□ -1.64
SRPK1-210ENST00000508473 PHGR1C9JFL3 82 aa4.6□□□□□ -1.67
SRPK1-210ENST00000508473 KRTAP4-4Q9BYR3 166 aa4.43□□□□□ -1.7
SRPK1-210ENST00000508473 PRM1P04553 51 aa4.06□□□□□ -1.76
SRPK1-210ENST00000508473 MUC19Q7Z5P9 8384 aa4.04□□□□□ -1.76
SRPK1-210ENST00000508473 INE1O15225 51 aa3.49□□□□□ -1.85
SRPK1-210ENST00000508473 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
SRPK1-210ENST00000508473 MUC16Q8WXI7 14507 aa2.9□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 113.2 ms