RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 V9GYY9 64 aa3.56□□□□□ -1.84
UBE2D3-223ENST00000508249 UQCR11O14957 56 aa3.55□□□□□ -1.84
UBE2D3-223ENST00000508249 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
UBE2D3-223ENST00000508249 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
UBE2D3-223ENST00000508249 A8MU10 97 aa3.52□□□□□ -1.85
UBE2D3-223ENST00000508249 MT4P47944 62 aa3.51□□□□□ -1.85
UBE2D3-223ENST00000508249 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
UBE2D3-223ENST00000508249 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
UBE2D3-223ENST00000508249 Q1T7F1 81 aa3.47□□□□□ -1.85
UBE2D3-223ENST00000508249 TNP1P09430 55 aa3.46□□□□□ -1.86
UBE2D3-223ENST00000508249 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
UBE2D3-223ENST00000508249 K7ERS5 55 aa3.44□□□□□ -1.86
UBE2D3-223ENST00000508249 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
UBE2D3-223ENST00000508249 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
UBE2D3-223ENST00000508249 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
UBE2D3-223ENST00000508249 MT1EP04732 61 aa3.41□□□□□ -1.86
UBE2D3-223ENST00000508249 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
UBE2D3-223ENST00000508249 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
UBE2D3-223ENST00000508249 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
UBE2D3-223ENST00000508249 PSPHP1O15172 72 aa3.39□□□□□ -1.87
UBE2D3-223ENST00000508249 PCP4P48539 62 aa3.38□□□□□ -1.87
UBE2D3-223ENST00000508249 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
UBE2D3-223ENST00000508249 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
UBE2D3-223ENST00000508249 A6NED7 52 aa3.33□□□□□ -1.88
UBE2D3-223ENST00000508249 KRTAP25-1Q3LHN0 102 aa3.33□□□□□ -1.88
UBE2D3-223ENST00000508249 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
UBE2D3-223ENST00000508249 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
UBE2D3-223ENST00000508249 MT1GP13640 62 aa3.31□□□□□ -1.88
UBE2D3-223ENST00000508249 MT1MQ8N339 61 aa3.27□□□□□ -1.89
UBE2D3-223ENST00000508249 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
UBE2D3-223ENST00000508249 MT1LQ93083 61 aa3.25□□□□□ -1.89
UBE2D3-223ENST00000508249 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
UBE2D3-223ENST00000508249 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
UBE2D3-223ENST00000508249 CDC42SE1Q9NRR8 79 aa3.23□□□□□ -1.89
UBE2D3-223ENST00000508249 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
UBE2D3-223ENST00000508249 ROMO1P60602 79 aa3.17□□□□□ -1.9
UBE2D3-223ENST00000508249 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-223ENST00000508249 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
UBE2D3-223ENST00000508249 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
UBE2D3-223ENST00000508249 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
UBE2D3-223ENST00000508249 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
UBE2D3-223ENST00000508249 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
UBE2D3-223ENST00000508249 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
UBE2D3-223ENST00000508249 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
UBE2D3-223ENST00000508249 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
UBE2D3-223ENST00000508249 BRK1Q8WUW1 75 aa2.95□□□□□ -1.94
UBE2D3-223ENST00000508249 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
UBE2D3-223ENST00000508249 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
UBE2D3-223ENST00000508249 MT1AP04731 61 aa2.8□□□□□ -1.96
UBE2D3-223ENST00000508249 PMAIP1Q13794 54 aa2.8□□□□□ -1.96
UBE2D3-223ENST00000508249 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
UBE2D3-223ENST00000508249 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
UBE2D3-223ENST00000508249 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
UBE2D3-223ENST00000508249 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
UBE2D3-223ENST00000508249 KRTAP6-2Q3LI66 62 aa2.66□□□□□ -1.98
UBE2D3-223ENST00000508249 SVIPQ8NHG7 77 aa2.61□□□□□ -1.99
UBE2D3-223ENST00000508249 PRAC1Q96KF2 57 aa2.6□□□□□ -1.99
UBE2D3-223ENST00000508249 MT3P25713 68 aa2.57□□□□□ -2
UBE2D3-223ENST00000508249 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
UBE2D3-223ENST00000508249 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
UBE2D3-223ENST00000508249 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
UBE2D3-223ENST00000508249 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
UBE2D3-223ENST00000508249 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
UBE2D3-223ENST00000508249 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
UBE2D3-223ENST00000508249 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
UBE2D3-223ENST00000508249 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
UBE2D3-223ENST00000508249 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
UBE2D3-223ENST00000508249 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
UBE2D3-223ENST00000508249 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
UBE2D3-223ENST00000508249 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
UBE2D3-223ENST00000508249 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
UBE2D3-223ENST00000508249 NDUFAF8A1L188 74 aa1.86□□□□□ -2.11
UBE2D3-223ENST00000508249 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
UBE2D3-223ENST00000508249 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
UBE2D3-223ENST00000508249 INE1O15225 51 aa1.6□□□□□ -2.15
UBE2D3-223ENST00000508249 PRM1P04553 51 aa1.58□□□□□ -2.16
UBE2D3-223ENST00000508249 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
UBE2D3-223ENST00000508249 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 172.2 ms