RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 ANAPC13Q9BS18 74 aa3.13□□□□□ -1.91
UBE2D3-222ENST00000508238 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
UBE2D3-222ENST00000508238 A0A1B0GU33 70 aa3.12□□□□□ -1.91
UBE2D3-222ENST00000508238 H7BZZ5 65 aa3.11□□□□□ -1.91
UBE2D3-222ENST00000508238 SPRR2DP22532 72 aa3.11□□□□□ -1.91
UBE2D3-222ENST00000508238 SMIM26A0A096LP01 95 aa3.09□□□□□ -1.91
UBE2D3-222ENST00000508238 A0A1B0GU69 56 aa3.09□□□□□ -1.91
UBE2D3-222ENST00000508238 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.91
UBE2D3-222ENST00000508238 ATP5EP56381 51 aaPredicted RBP3.08□□□□□ -1.92
UBE2D3-222ENST00000508238 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
UBE2D3-222ENST00000508238 A0A0D9SG42 100 aa3.05□□□□□ -1.92
UBE2D3-222ENST00000508238 SPINT4Q6UDR6 99 aa3.05□□□□□ -1.92
UBE2D3-222ENST00000508238 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
UBE2D3-222ENST00000508238 SPATA8Q6RVD6 105 aa3.02□□□□□ -1.93
UBE2D3-222ENST00000508238 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
UBE2D3-222ENST00000508238 CYSTM1Q9H1C7 97 aa2.99□□□□□ -1.93
UBE2D3-222ENST00000508238 CCDC179H3BU77 68 aa2.97□□□□□ -1.93
UBE2D3-222ENST00000508238 MT1EP04732 61 aa2.96□□□□□ -1.94
UBE2D3-222ENST00000508238 KRTAP12-1P59990 96 aa2.96□□□□□ -1.94
UBE2D3-222ENST00000508238 TMEM258P61165 79 aa2.96□□□□□ -1.94
UBE2D3-222ENST00000508238 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
UBE2D3-222ENST00000508238 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
UBE2D3-222ENST00000508238 LINC01558Q9Y6Z2 57 aa2.95□□□□□ -1.94
UBE2D3-222ENST00000508238 UQCR11O14957 56 aa2.94□□□□□ -1.94
UBE2D3-222ENST00000508238 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
UBE2D3-222ENST00000508238 TNP1P09430 55 aa2.93□□□□□ -1.94
UBE2D3-222ENST00000508238 V9GYY9 64 aa2.91□□□□□ -1.94
UBE2D3-222ENST00000508238 K7ERS5 55 aa2.9□□□□□ -1.95
UBE2D3-222ENST00000508238 MT1GP13640 62 aa2.89□□□□□ -1.95
UBE2D3-222ENST00000508238 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
UBE2D3-222ENST00000508238 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
UBE2D3-222ENST00000508238 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
UBE2D3-222ENST00000508238 C10orf95Q9H7T3 257 aa2.84□□□□□ -1.95
UBE2D3-222ENST00000508238 MIR22HGQ0VDD5 57 aa2.83□□□□□ -1.96
UBE2D3-222ENST00000508238 MT1MQ8N339 61 aa2.82□□□□□ -1.96
UBE2D3-222ENST00000508238 MT1LQ93083 61 aa2.82□□□□□ -1.96
UBE2D3-222ENST00000508238 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
UBE2D3-222ENST00000508238 Q1T7F1 81 aa2.79□□□□□ -1.96
UBE2D3-222ENST00000508238 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
UBE2D3-222ENST00000508238 KRTAP25-1Q3LHN0 102 aa2.78□□□□□ -1.96
UBE2D3-222ENST00000508238 PSPHP1O15172 72 aa2.74□□□□□ -1.97
UBE2D3-222ENST00000508238 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
UBE2D3-222ENST00000508238 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
UBE2D3-222ENST00000508238 A6NED7 52 aa2.71□□□□□ -1.98
UBE2D3-222ENST00000508238 MT4P47944 62 aa2.71□□□□□ -1.98
UBE2D3-222ENST00000508238 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
UBE2D3-222ENST00000508238 CDC42SE1Q9NRR8 79 aa2.67□□□□□ -1.98
UBE2D3-222ENST00000508238 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
UBE2D3-222ENST00000508238 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
UBE2D3-222ENST00000508238 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
UBE2D3-222ENST00000508238 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
UBE2D3-222ENST00000508238 ROMO1P60602 79 aa2.59□□□□□ -1.99
UBE2D3-222ENST00000508238 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
UBE2D3-222ENST00000508238 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
UBE2D3-222ENST00000508238 KRTAP12-4P60329 112 aa2.54□□□□□ -2
UBE2D3-222ENST00000508238 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
UBE2D3-222ENST00000508238 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
UBE2D3-222ENST00000508238 MT1AP04731 61 aa2.41□□□□□ -2.02
UBE2D3-222ENST00000508238 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
UBE2D3-222ENST00000508238 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
UBE2D3-222ENST00000508238 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
UBE2D3-222ENST00000508238 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
UBE2D3-222ENST00000508238 BRK1Q8WUW1 75 aa2.33□□□□□ -2.04
UBE2D3-222ENST00000508238 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
UBE2D3-222ENST00000508238 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
UBE2D3-222ENST00000508238 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
UBE2D3-222ENST00000508238 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
UBE2D3-222ENST00000508238 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
UBE2D3-222ENST00000508238 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
UBE2D3-222ENST00000508238 PRO0628Q9UI54 55 aa2.07□□□□□ -2.08
UBE2D3-222ENST00000508238 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
UBE2D3-222ENST00000508238 KTN1-AS1Q86SY8 53 aa1.96□□□□□ -2.1
UBE2D3-222ENST00000508238 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
UBE2D3-222ENST00000508238 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
UBE2D3-222ENST00000508238 PRM1P04553 51 aa1.27□□□□□ -2.21
UBE2D3-222ENST00000508238 INE1O15225 51 aa1.25□□□□□ -2.21
UBE2D3-222ENST00000508238 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
UBE2D3-222ENST00000508238 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 59.5 ms