RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
CLDND1-217ENST00000508071 TNP1P09430 55 aa5.98□□□□□ -1.45
CLDND1-217ENST00000508071 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
CLDND1-217ENST00000508071 KRTAP5-5Q701N2 237 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-217ENST00000508071 SMIM26A0A096LP01 95 aa5.89□□□□□ -1.47
CLDND1-217ENST00000508071 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
CLDND1-217ENST00000508071 A8MU10 97 aa5.83□□□□□ -1.48
CLDND1-217ENST00000508071 SERP2Q8N6R1 65 aa5.81□□□□□ -1.48
CLDND1-217ENST00000508071 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
CLDND1-217ENST00000508071 A0A1B0GU69 56 aa5.73□□□□□ -1.49
CLDND1-217ENST00000508071 K7ERU9 68 aa5.71□□□□□ -1.5
CLDND1-217ENST00000508071 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
CLDND1-217ENST00000508071 KRTAP4-12Q9BQ66 201 aa5.62□□□□□ -1.51
CLDND1-217ENST00000508071 AHNAKQ09666 5890 aaKnown RBP5.54□□□□□ -1.52
CLDND1-217ENST00000508071 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
CLDND1-217ENST00000508071 MUC5ACP98088 5654 aa5.51□□□□□ -1.53
CLDND1-217ENST00000508071 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
CLDND1-217ENST00000508071 H7BZZ5 65 aa5.51□□□□□ -1.53
CLDND1-217ENST00000508071 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
CLDND1-217ENST00000508071 COX7CP15954 63 aa5.48□□□□□ -1.53
CLDND1-217ENST00000508071 KRTAP5-8O75690 187 aa5.47□□□□□ -1.53
CLDND1-217ENST00000508071 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
CLDND1-217ENST00000508071 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
CLDND1-217ENST00000508071 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
CLDND1-217ENST00000508071 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
CLDND1-217ENST00000508071 MT1AP04731 61 aa5.39□□□□□ -1.55
CLDND1-217ENST00000508071 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
CLDND1-217ENST00000508071 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
CLDND1-217ENST00000508071 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
CLDND1-217ENST00000508071 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
CLDND1-217ENST00000508071 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
CLDND1-217ENST00000508071 LINC01558Q9Y6Z2 57 aa5.23□□□□□ -1.57
CLDND1-217ENST00000508071 UQCR11O14957 56 aa5.22□□□□□ -1.57
CLDND1-217ENST00000508071 H3BS24 57 aa5.19□□□□□ -1.58
CLDND1-217ENST00000508071 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
CLDND1-217ENST00000508071 K7ERS5 55 aa5.09□□□□□ -1.59
CLDND1-217ENST00000508071 ATP5EP56381 51 aaPredicted RBP5.06□□□□□ -1.6
CLDND1-217ENST00000508071 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
CLDND1-217ENST00000508071 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
CLDND1-217ENST00000508071 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
CLDND1-217ENST00000508071 ANAPC13Q9BS18 74 aa5.02□□□□□ -1.61
CLDND1-217ENST00000508071 MT3P25713 68 aa4.97□□□□□ -1.61
CLDND1-217ENST00000508071 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
CLDND1-217ENST00000508071 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
CLDND1-217ENST00000508071 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
CLDND1-217ENST00000508071 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
CLDND1-217ENST00000508071 TMEM258P61165 79 aa4.72□□□□□ -1.65
CLDND1-217ENST00000508071 PSPHP1O15172 72 aa4.68□□□□□ -1.66
CLDND1-217ENST00000508071 Q1T7F1 81 aa4.68□□□□□ -1.66
CLDND1-217ENST00000508071 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
CLDND1-217ENST00000508071 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
CLDND1-217ENST00000508071 ROMO1P60602 79 aa4.61□□□□□ -1.67
CLDND1-217ENST00000508071 V9GYY9 64 aa4.6□□□□□ -1.67
CLDND1-217ENST00000508071 A6NED7 52 aa4.5□□□□□ -1.69
CLDND1-217ENST00000508071 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
CLDND1-217ENST00000508071 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
CLDND1-217ENST00000508071 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
CLDND1-217ENST00000508071 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
CLDND1-217ENST00000508071 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
CLDND1-217ENST00000508071 PCP4P48539 62 aa3.84□□□□□ -1.79
CLDND1-217ENST00000508071 PHGR1C9JFL3 82 aa3.83□□□□□ -1.8
CLDND1-217ENST00000508071 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
CLDND1-217ENST00000508071 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
CLDND1-217ENST00000508071 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
CLDND1-217ENST00000508071 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
CLDND1-217ENST00000508071 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
CLDND1-217ENST00000508071 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
CLDND1-217ENST00000508071 BRK1Q8WUW1 75 aa3.25□□□□□ -1.89
CLDND1-217ENST00000508071 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
CLDND1-217ENST00000508071 PMAIP1Q13794 54 aa3.02□□□□□ -1.93
CLDND1-217ENST00000508071 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
CLDND1-217ENST00000508071 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
CLDND1-217ENST00000508071 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
CLDND1-217ENST00000508071 PRO0628Q9UI54 55 aa2.51□□□□□ -2.01
CLDND1-217ENST00000508071 PRM1P04553 51 aa2.33□□□□□ -2.04
CLDND1-217ENST00000508071 KTN1-AS1Q86SY8 53 aa2.31□□□□□ -2.04
CLDND1-217ENST00000508071 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
CLDND1-217ENST00000508071 INE1O15225 51 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 60.3 ms