RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 LCE3AQ5TA76 89 aa1.11□□□□□ -2.23
ITGA1-204ENST00000506275 KRTAP12-3P60328 96 aa1.11□□□□□ -2.23
ITGA1-204ENST00000506275 SYNE1Q8NF91 8797 aaKnown RBP1.09□□□□□ -2.23
ITGA1-204ENST00000506275 APOBP04114 4563 aaKnown RBP1.08□□□□□ -2.24
ITGA1-204ENST00000506275 KRTAP8-1Q8IUC2 63 aa1.08□□□□□ -2.24
ITGA1-204ENST00000506275 INE1O15225 51 aa1.07□□□□□ -2.24
ITGA1-204ENST00000506275 KRTAP10-7P60409 375 aaPredicted RBP1.06□□□□□ -2.24
ITGA1-204ENST00000506275 USH2AO75445 5202 aa1.05□□□□□ -2.24
ITGA1-204ENST00000506275 MT3P25713 68 aa1.04□□□□□ -2.24
ITGA1-204ENST00000506275 LCE3CQ5T5A8 94 aa1.04□□□□□ -2.24
ITGA1-204ENST00000506275 SPRR2FQ96RM1 72 aa1.04□□□□□ -2.24
ITGA1-204ENST00000506275 KRTAP4-1Q9BYQ7 146 aa1.03□□□□□ -2.24
ITGA1-204ENST00000506275 KRTAP9-7A8MTY7 169 aa1.03□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP5-8O75690 187 aa1.03□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP10-4P60372 401 aaPredicted RBP1.02□□□□□ -2.25
ITGA1-204ENST00000506275 FSIP2Q5CZC0 6907 aa1.01□□□□□ -2.25
ITGA1-204ENST00000506275 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
ITGA1-204ENST00000506275 MT1HP80294 61 aa0.99□□□□□ -2.25
ITGA1-204ENST00000506275 LPAP08519 4548 aa0.97□□□□□ -2.25
ITGA1-204ENST00000506275 MT2AP02795 61 aa0.97□□□□□ -2.25
ITGA1-204ENST00000506275 MT1FP04733 61 aa0.97□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP9-3Q9BYQ3 159 aa0.96□□□□□ -2.26
ITGA1-204ENST00000506275 KRTAP5-5Q701N2 237 aaPredicted RBP0.95□□□□□ -2.26
ITGA1-204ENST00000506275 MT1GP13640 62 aa0.95□□□□□ -2.26
ITGA1-204ENST00000506275 MUC19Q7Z5P9 8384 aa0.95□□□□□ -2.26
ITGA1-204ENST00000506275 SPRR2EP22531 72 aa0.94□□□□□ -2.26
ITGA1-204ENST00000506275 SPRR2BP35325 72 aa0.94□□□□□ -2.26
ITGA1-204ENST00000506275 SPRR2AP35326 72 aa0.94□□□□□ -2.26
ITGA1-204ENST00000506275 LCE3EQ5T5B0 92 aa0.94□□□□□ -2.26
ITGA1-204ENST00000506275 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
ITGA1-204ENST00000506275 MUC17Q685J3 4493 aa0.93□□□□□ -2.26
ITGA1-204ENST00000506275 KRTAP12-4P60329 112 aa0.93□□□□□ -2.26
ITGA1-204ENST00000506275 LCE5AQ5TCM9 118 aa0.93□□□□□ -2.26
ITGA1-204ENST00000506275 SPRR2GQ9BYE4 73 aa0.92□□□□□ -2.26
ITGA1-204ENST00000506275 KRTAP5-11Q6L8G4 156 aa0.9□□□□□ -2.27
ITGA1-204ENST00000506275 SPRR2DP22532 72 aa0.9□□□□□ -2.27
ITGA1-204ENST00000506275 NEBP20929 6669 aa0.89□□□□□ -2.27
ITGA1-204ENST00000506275 MT4P47944 62 aa0.89□□□□□ -2.27
ITGA1-204ENST00000506275 KRTAP5-1Q6L8H4 278 aa0.88□□□□□ -2.27
ITGA1-204ENST00000506275 SPRR5A0A1B0GTR4 108 aa0.88□□□□□ -2.27
ITGA1-204ENST00000506275 LCE3DQ9BYE3 92 aa0.88□□□□□ -2.27
ITGA1-204ENST00000506275 MT1XP80297 61 aa0.87□□□□□ -2.27
ITGA1-204ENST00000506275 MACF1Q9UPN3 7388 aaKnown RBP0.86□□□□□ -2.27
ITGA1-204ENST00000506275 LCE1AQ5T7P2 110 aa0.86□□□□□ -2.27
ITGA1-204ENST00000506275 LCE1BQ5T7P3 118 aa0.86□□□□□ -2.27
ITGA1-204ENST00000506275 KRTAP4-3Q9BYR4 195 aa0.85□□□□□ -2.27
ITGA1-204ENST00000506275 LCE1FQ5T754 118 aa0.85□□□□□ -2.27
ITGA1-204ENST00000506275 MT1BP07438 61 aa0.84□□□□□ -2.27
ITGA1-204ENST00000506275 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.28
ITGA1-204ENST00000506275 PRM1P04553 51 aa0.82□□□□□ -2.28
ITGA1-204ENST00000506275 KRTAP2-2Q9BYT5 123 aa0.82□□□□□ -2.28
ITGA1-204ENST00000506275 KRTAP19-8Q3LI54 63 aa0.81□□□□□ -2.28
ITGA1-204ENST00000506275 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
ITGA1-204ENST00000506275 MT1LQ93083 61 aa0.78□□□□□ -2.28
ITGA1-204ENST00000506275 MT1EP04732 61 aa0.77□□□□□ -2.29
ITGA1-204ENST00000506275 MT1MQ8N339 61 aa0.76□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP19-6Q3LI70 58 aa0.75□□□□□ -2.29
ITGA1-204ENST00000506275 LCE1CQ5T751 118 aa0.75□□□□□ -2.29
ITGA1-204ENST00000506275 LCE1EQ5T753 118 aa0.75□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP6-3Q3LI67 103 aa0.74□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP2-3P0C7H8 128 aa0.73□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP2-4Q9BYR9 128 aa0.73□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP19-2Q3LHN2 52 aa0.72□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP19-7Q3SYF9 63 aa0.71□□□□□ -2.3
ITGA1-204ENST00000506275 KRTAP6-1Q3LI64 71 aa0.7□□□□□ -2.3
ITGA1-204ENST00000506275 KRTAP9-6A8MVA2 160 aa0.69□□□□□ -2.3
ITGA1-204ENST00000506275 KRTAP5-7Q6L8G8 165 aa0.67□□□□□ -2.3
ITGA1-204ENST00000506275 MT1AP04731 61 aa0.67□□□□□ -2.3
ITGA1-204ENST00000506275 KRTAP20-2Q3LI61 65 aa0.62□□□□□ -2.31
ITGA1-204ENST00000506275 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
ITGA1-204ENST00000506275 MUC16Q8WXI7 14507 aa0.4□□□□□ -2.35
ITGA1-204ENST00000506275 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
ITGA1-204ENST00000506275 KRTAP21-2Q3LI59 83 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 109.4 ms