RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 DEFB136Q30KP8 78 aa-1.4□□□□□ -2.63
CHD1-203ENST00000505657 DMDP11532 3685 aa-1.4□□□□□ -2.63
CHD1-203ENST00000505657 CLTCL1P53675 1640 aa-1.4□□□□□ -2.63
CHD1-203ENST00000505657 FRYLO94915 3013 aa-1.41□□□□□ -2.63
CHD1-203ENST00000505657 ABCC8Q09428 1581 aa-1.41□□□□□ -2.63
CHD1-203ENST00000505657 MT1FP04733 61 aa-1.42□□□□□ -2.64
CHD1-203ENST00000505657 PCNTO95613 3336 aa-1.44□□□□□ -2.64
CHD1-203ENST00000505657 NFAT5O94916 1531 aa-1.44□□□□□ -2.64
CHD1-203ENST00000505657 SMIM2Q9BVW6 85 aa-1.44□□□□□ -2.64
CHD1-203ENST00000505657 FANCD2Q9BXW9 1451 aa-1.48□□□□□ -2.65
CHD1-203ENST00000505657 ERICH3Q5RHP9 1530 aa-1.48□□□□□ -2.65
CHD1-203ENST00000505657 CMC2Q9NRP2 79 aa-1.48□□□□□ -2.65
CHD1-203ENST00000505657 DCHS1Q96JQ0 3298 aa-1.49□□□□□ -2.65
CHD1-203ENST00000505657 TRPM2O94759 1503 aa-1.5□□□□□ -2.65
CHD1-203ENST00000505657 CEP350Q5VT06 3117 aa-1.5□□□□□ -2.65
CHD1-203ENST00000505657 CEP250Q9BV73 2442 aa-1.51□□□□□ -2.65
CHD1-203ENST00000505657 SZT2Q5T011 3432 aa-1.51□□□□□ -2.65
CHD1-203ENST00000505657 SPEGQ15772 3267 aa-1.51□□□□□ -2.65
CHD1-203ENST00000505657 RPS29P62273 56 aaKnown RBP-1.52□□□□□ -2.65
CHD1-203ENST00000505657 EP400Q96L91 3159 aa-1.54□□□□□ -2.66
CHD1-203ENST00000505657 WDFY4Q6ZS81 3184 aa-1.55□□□□□ -2.66
CHD1-203ENST00000505657 LOC400499M0QZD8 3231 aa-1.57□□□□□ -2.66
CHD1-203ENST00000505657 NDUFA1O15239 70 aa-1.6□□□□□ -2.67
CHD1-203ENST00000505657 MUC3AQ02505 3323 aa-1.6□□□□□ -2.67
CHD1-203ENST00000505657 XIRP2A4UGR9 3374 aa-1.64□□□□□ -2.67
CHD1-203ENST00000505657 MKI67P46013 3256 aaKnown RBP-1.66□□□□□ -2.68
CHD1-203ENST00000505657 VCANP13611 3396 aa-1.67□□□□□ -2.68
CHD1-203ENST00000505657 USP34Q70CQ2 3546 aa-1.69□□□□□ -2.68
CHD1-203ENST00000505657 DNAH12Q6ZR08 3092 aa-1.7□□□□□ -2.68
CHD1-203ENST00000505657 DNAH14Q0VDD8 3507 aa-1.72□□□□□ -2.68
CHD1-203ENST00000505657 CFAP47Q6ZTR5 3102 aa-1.73□□□□□ -2.69
CHD1-203ENST00000505657 UNC80Q8N2C7 3258 aa-1.74□□□□□ -2.69
CHD1-203ENST00000505657 SNRPGP15A8MWD9 76 aa-1.75□□□□□ -2.69
CHD1-203ENST00000505657 LINC01590Q5TEZ4 76 aa-1.77□□□□□ -2.69
CHD1-203ENST00000505657 TOMM7Q9P0U1 55 aa-1.77□□□□□ -2.69
CHD1-203ENST00000505657 KRTAP19-2Q3LHN2 52 aa-1.78□□□□□ -2.69
CHD1-203ENST00000505657 IQGAP2Q13576 1575 aa-1.81□□□□□ -2.7
CHD1-203ENST00000505657 SAMD9LQ8IVG5 1584 aa-1.81□□□□□ -2.7
CHD1-203ENST00000505657 DUOX1Q9NRD9 1551 aa-1.81□□□□□ -2.7
CHD1-203ENST00000505657 RHPN1-AS1Q9BWJ2 59 aa-1.81□□□□□ -2.7
CHD1-203ENST00000505657 ASPMQ8IZT6 3477 aa-1.83□□□□□ -2.7
CHD1-203ENST00000505657 CENPFP49454 3210 aa-1.86□□□□□ -2.71
CHD1-203ENST00000505657 DEFB133Q30KQ1 61 aa-1.86□□□□□ -2.71
CHD1-203ENST00000505657 RPL39P62891 51 aaKnown RBP-1.89□□□□□ -2.71
CHD1-203ENST00000505657 ATP7AQ04656 1500 aa-1.9□□□□□ -2.71
CHD1-203ENST00000505657 TTTY10Q9BZA0 68 aa-1.9□□□□□ -2.71
CHD1-203ENST00000505657 BRCA2P51587 3418 aa-1.92□□□□□ -2.72
CHD1-203ENST00000505657 A0A096LNI7 61 aa-1.93□□□□□ -2.72
CHD1-203ENST00000505657 TOP2AP11388 1531 aaKnown RBP-1.93□□□□□ -2.72
CHD1-203ENST00000505657 TOMM5Q8N4H5 51 aa-1.95□□□□□ -2.72
CHD1-203ENST00000505657 MROH2BQ7Z745 1585 aa-1.95□□□□□ -2.72
CHD1-203ENST00000505657 DEFB124Q8NES8 71 aa-1.96□□□□□ -2.72
CHD1-203ENST00000505657 CDH23Q9H251 3354 aa-1.96□□□□□ -2.72
CHD1-203ENST00000505657 HTN1P15515 57 aa-1.97□□□□□ -2.72
CHD1-203ENST00000505657 RPL39LQ96EH5 51 aaKnown RBP-1.97□□□□□ -2.72
CHD1-203ENST00000505657 CD52P31358 61 aa-2□□□□□ -2.73
CHD1-203ENST00000505657 VPS13AQ96RL7 3174 aa-2.04□□□□□ -2.74
CHD1-203ENST00000505657 UTRNP46939 3433 aa-2.1□□□□□ -2.75
CHD1-203ENST00000505657 DEFB104AQ8WTQ1 72 aa-2.12□□□□□ -2.75
CHD1-203ENST00000505657 H3BUX3 64 aa-2.17□□□□□ -2.76
CHD1-203ENST00000505657 GOLGB1Q14789 3259 aaKnown RBP-2.23□□□□□ -2.77
CHD1-203ENST00000505657 LINC01556Q5JQF7 62 aa-2.25□□□□□ -2.77
CHD1-203ENST00000505657 K7EIM0 57 aa-2.26□□□□□ -2.77
CHD1-203ENST00000505657 GCC2Q8IWJ2 1684 aa-2.31□□□□□ -2.78
CHD1-203ENST00000505657 ARHGAP5-AS1Q96IT6 56 aa-2.37□□□□□ -2.79
CHD1-203ENST00000505657 SNRPGP62308 76 aaKnown RBP-2.4□□□□□ -2.79
CHD1-203ENST00000505657 PRCDQ00LT1 54 aa-2.4□□□□□ -2.79
CHD1-203ENST00000505657 A0A096LPF7 62 aa-2.49□□□□□ -2.81
CHD1-203ENST00000505657 APELAP0DMC3 54 aa-2.5□□□□□ -2.81
CHD1-203ENST00000505657 TMEM167AQ8TBQ9 72 aa-2.52□□□□□ -2.81
CHD1-203ENST00000505657 RPL39P5Q59GN2 51 aa-2.65□□□□□ -2.83
CHD1-203ENST00000505657 HTN3P15516 51 aa-2.7□□□□□ -2.84
CHD1-203ENST00000505657 H3BSH0 61 aa-2.71□□□□□ -2.84
CHD1-203ENST00000505657 DEFB108AA8MXU0 73 aa-2.72□□□□□ -2.84
CHD1-203ENST00000505657 Q9Y3F1 56 aa-2.73□□□□□ -2.85
CHD1-203ENST00000505657 COX14Q96I36 57 aa-2.97□□□□□ -2.88
CHD1-203ENST00000505657 STATHP02808 62 aa-3.06□□□□□ -2.9
CHD1-203ENST00000505657 DEFB108BQ8NET1 73 aa-3.06□□□□□ -2.9
Retrieved 78 of 20,778 RNA–protein pairs in 112.8 ms