RNA–Protein interactions for RNA: ENST00000505490.2

ALYREF-202, Transcript of Aly/REF export factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALYREF, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-202ENST00000505490 KRTAP4-3Q9BYR4 195 aa10.53□□□□□ -0.72
ALYREF-202ENST00000505490 C10orf95Q9H7T3 257 aa10.38□□□□□ -0.75
ALYREF-202ENST00000505490 LCE3AQ5TA76 89 aa10.35□□□□□ -0.75
ALYREF-202ENST00000505490 A0A1B0GU69 56 aa10.31□□□□□ -0.76
ALYREF-202ENST00000505490 KRTAP5-7Q6L8G8 165 aa10.31□□□□□ -0.76
ALYREF-202ENST00000505490 A8MU10 97 aa10.28□□□□□ -0.76
ALYREF-202ENST00000505490 RPS28P62857 69 aaKnown RBP10.28□□□□□ -0.76
ALYREF-202ENST00000505490 SMIM26A0A096LP01 95 aa10.27□□□□□ -0.77
ALYREF-202ENST00000505490 KRTAP5-3Q6L8H2 238 aa10.23□□□□□ -0.77
ALYREF-202ENST00000505490 TNP1P09430 55 aa10.17□□□□□ -0.78
ALYREF-202ENST00000505490 KRTAP4-7Q9BYR0 210 aa10.12□□□□□ -0.79
ALYREF-202ENST00000505490 KRTAP20-2Q3LI61 65 aa10.08□□□□□ -0.8
ALYREF-202ENST00000505490 KRTAP5-5Q701N2 237 aaPredicted RBP10.04□□□□□ -0.8
ALYREF-202ENST00000505490 SPRR5A0A1B0GTR4 108 aa10□□□□□ -0.81
ALYREF-202ENST00000505490 LINC01558Q9Y6Z2 57 aa9.98□□□□□ -0.81
ALYREF-202ENST00000505490 KRTAP12-3P60328 96 aa9.96□□□□□ -0.82
ALYREF-202ENST00000505490 PRR15LQ9BU68 103 aa9.91□□□□□ -0.82
ALYREF-202ENST00000505490 V9GYY9 64 aa9.89□□□□□ -0.83
ALYREF-202ENST00000505490 Q1T7F1 81 aa9.85□□□□□ -0.83
ALYREF-202ENST00000505490 KRTAP12-4P60329 112 aa9.79□□□□□ -0.84
ALYREF-202ENST00000505490 SYNE1Q8NF91 8797 aaKnown RBP9.77□□□□□ -0.85
ALYREF-202ENST00000505490 UQCR11O14957 56 aa9.66□□□□□ -0.86
ALYREF-202ENST00000505490 PSPHP1O15172 72 aa9.64□□□□□ -0.87
ALYREF-202ENST00000505490 LOC100996750A0A140TA64 210 aa9.62□□□□□ -0.87
ALYREF-202ENST00000505490 KRTAP19-4Q3LI73 84 aa9.46□□□□□ -0.9
ALYREF-202ENST00000505490 KRTAP25-1Q3LHN0 102 aa9.45□□□□□ -0.9
ALYREF-202ENST00000505490 MIR22HGQ0VDD5 57 aa9.42□□□□□ -0.9
ALYREF-202ENST00000505490 A6NED7 52 aa9.39□□□□□ -0.91
ALYREF-202ENST00000505490 KRTAP4-11Q9BYQ6 195 aa9.34□□□□□ -0.91
ALYREF-202ENST00000505490 KRTAP5-2Q701N4 177 aa9.29□□□□□ -0.92
ALYREF-202ENST00000505490 BRK1Q8WUW1 75 aa9.25□□□□□ -0.93
ALYREF-202ENST00000505490 CDC42SE1Q9NRR8 79 aa9.23□□□□□ -0.93
ALYREF-202ENST00000505490 KRTAP23-1A1A580 65 aa9.18□□□□□ -0.94
ALYREF-202ENST00000505490 LCE3CQ5T5A8 94 aa9.13□□□□□ -0.95
ALYREF-202ENST00000505490 K7ERS5 55 aa9.12□□□□□ -0.95
ALYREF-202ENST00000505490 KRTAP15-1Q3LI76 137 aa9.11□□□□□ -0.95
ALYREF-202ENST00000505490 MT1AP04731 61 aa9.1□□□□□ -0.95
ALYREF-202ENST00000505490 KRTAP6-1Q3LI64 71 aa9.08□□□□□ -0.96
ALYREF-202ENST00000505490 KRTAP5-8O75690 187 aa9.07□□□□□ -0.96
ALYREF-202ENST00000505490 PRO0628Q9UI54 55 aa9.04□□□□□ -0.96
ALYREF-202ENST00000505490 MUC5ACP98088 5654 aa8.98□□□□□ -0.97
ALYREF-202ENST00000505490 AHNAKQ09666 5890 aaKnown RBP8.97□□□□□ -0.97
ALYREF-202ENST00000505490 MUC5BQ9HC84 5762 aaPredicted RBP8.94□□□□□ -0.98
ALYREF-202ENST00000505490 KRTAP9-4Q9BYQ2 154 aa8.86□□□□□ -0.99
ALYREF-202ENST00000505490 OBSCNQ5VST9 7968 aa8.82□□□□□ -1
ALYREF-202ENST00000505490 KRTAP6-2Q3LI66 62 aa8.76□□□□□ -1.01
ALYREF-202ENST00000505490 PMAIP1Q13794 54 aa8.74□□□□□ -1.01
ALYREF-202ENST00000505490 KRTAP9-6A8MVA2 160 aa8.69□□□□□ -1.02
ALYREF-202ENST00000505490 ROMO1P60602 79 aa8.62□□□□□ -1.03
ALYREF-202ENST00000505490 KRTAP9-9Q9BYP9 154 aa8.62□□□□□ -1.03
ALYREF-202ENST00000505490 KRTAP5-1Q6L8H4 278 aa8.43□□□□□ -1.06
ALYREF-202ENST00000505490 KTN1-AS1Q86SY8 53 aa8.39□□□□□ -1.07
ALYREF-202ENST00000505490 MT3P25713 68 aa8.33□□□□□ -1.08
ALYREF-202ENST00000505490 SVIPQ8NHG7 77 aa8.15□□□□□ -1.1
ALYREF-202ENST00000505490 PRAC1Q96KF2 57 aa8.15□□□□□ -1.1
ALYREF-202ENST00000505490 LCE1EQ5T753 118 aa7.86□□□□□ -1.15
ALYREF-202ENST00000505490 KRTAP4-2Q9BYR5 136 aa7.48□□□□□ -1.21
ALYREF-202ENST00000505490 KRTAP4-12Q9BQ66 201 aa7.46□□□□□ -1.22
ALYREF-202ENST00000505490 LCE1BQ5T7P3 118 aa7.3□□□□□ -1.24
ALYREF-202ENST00000505490 LCE1CQ5T751 118 aa7.29□□□□□ -1.24
ALYREF-202ENST00000505490 LUZP6Q538Z0 58 aa6.74□□□□□ -1.33
ALYREF-202ENST00000505490 KRTAP5-11Q6L8G4 156 aa6.67□□□□□ -1.34
ALYREF-202ENST00000505490 LCE1FQ5T754 118 aa6.62□□□□□ -1.35
ALYREF-202ENST00000505490 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.61□□□□□ -1.35
ALYREF-202ENST00000505490 NDUFAF8A1L188 74 aa6.48□□□□□ -1.37
ALYREF-202ENST00000505490 LCE3DQ9BYE3 92 aa6.43□□□□□ -1.38
ALYREF-202ENST00000505490 H3BS24 57 aa6.38□□□□□ -1.39
ALYREF-202ENST00000505490 PHGR1C9JFL3 82 aa6.14□□□□□ -1.43
ALYREF-202ENST00000505490 KRTAP21-2Q3LI59 83 aa6.04□□□□□ -1.44
ALYREF-202ENST00000505490 LCE3EQ5T5B0 92 aa5.97□□□□□ -1.45
ALYREF-202ENST00000505490 A0A0A0MQY5 61 aa5.76□□□□□ -1.49
ALYREF-202ENST00000505490 KRTAP4-4Q9BYR3 166 aa5.5□□□□□ -1.53
ALYREF-202ENST00000505490 MUC19Q7Z5P9 8384 aa5.49□□□□□ -1.53
ALYREF-202ENST00000505490 INE1O15225 51 aa5.42□□□□□ -1.54
ALYREF-202ENST00000505490 KRTAP21-1Q3LI58 79 aa4.7□□□□□ -1.66
ALYREF-202ENST00000505490 PRM1P04553 51 aa4.41□□□□□ -1.7
ALYREF-202ENST00000505490 MUC16Q8WXI7 14507 aa3.89□□□□□ -1.79
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms