RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 NEBP20929 6669 aa-0.21□□□□□ -2.44
HMGB1P22-201ENST00000505315 EPPK1P58107 5090 aaKnown RBP-0.22□□□□□ -2.44
HMGB1P22-201ENST00000505315 RNF213Q63HN8 5207 aa-0.22□□□□□ -2.44
HMGB1P22-201ENST00000505315 MT4P47944 62 aa-0.22□□□□□ -2.44
HMGB1P22-201ENST00000505315 DMXL2Q8TDJ6 3036 aa-0.22□□□□□ -2.45
HMGB1P22-201ENST00000505315 LAMA2P24043 3122 aaKnown RBP-0.23□□□□□ -2.45
HMGB1P22-201ENST00000505315 DNHD1Q96M86 4753 aa-0.23□□□□□ -2.45
HMGB1P22-201ENST00000505315 KIAA1109Q2LD37 5005 aa-0.24□□□□□ -2.45
HMGB1P22-201ENST00000505315 SRCAPQ6ZRS2 3230 aa-0.25□□□□□ -2.45
HMGB1P22-201ENST00000505315 RPL39P5Q59GN2 51 aa-0.25□□□□□ -2.45
HMGB1P22-201ENST00000505315 TLN1Q9Y490 2541 aaKnown RBP-0.25□□□□□ -2.45
HMGB1P22-201ENST00000505315 BIRC6Q9NR09 4857 aa-0.27□□□□□ -2.45
HMGB1P22-201ENST00000505315 MT1GP13640 62 aa-0.27□□□□□ -2.45
HMGB1P22-201ENST00000505315 CD52P31358 61 aa-0.27□□□□□ -2.45
HMGB1P22-201ENST00000505315 DNAH5Q8TE73 4624 aa-0.28□□□□□ -2.45
HMGB1P22-201ENST00000505315 NIPBLQ6KC79 2804 aaeCLIP-0.29□□□□□ -2.46
HMGB1P22-201ENST00000505315 DEFB108AA8MXU0 73 aa-0.29□□□□□ -2.46
HMGB1P22-201ENST00000505315 CFAP54Q96N23 3096 aa-0.29□□□□□ -2.46
HMGB1P22-201ENST00000505315 RYR2Q92736 4967 aa-0.29□□□□□ -2.46
HMGB1P22-201ENST00000505315 RPS29P62273 56 aaKnown RBP-0.32□□□□□ -2.46
HMGB1P22-201ENST00000505315 CEP295Q9C0D2 2601 aa-0.34□□□□□ -2.46
HMGB1P22-201ENST00000505315 TRRAPQ9Y4A5 3859 aa-0.34□□□□□ -2.46
HMGB1P22-201ENST00000505315 MT1HL1P0DM35 61 aa-0.35□□□□□ -2.47
HMGB1P22-201ENST00000505315 APELAP0DMC3 54 aa-0.35□□□□□ -2.47
HMGB1P22-201ENST00000505315 SMG1Q96Q15 3661 aaKnown RBP-0.35□□□□□ -2.47
HMGB1P22-201ENST00000505315 CSMD2Q7Z408 3487 aa-0.37□□□□□ -2.47
HMGB1P22-201ENST00000505315 ITPR2Q14571 2701 aa-0.38□□□□□ -2.47
HMGB1P22-201ENST00000505315 PRUNE2Q8WUY3 3088 aa-0.39□□□□□ -2.47
HMGB1P22-201ENST00000505315 MT2AP02795 61 aa-0.39□□□□□ -2.47
HMGB1P22-201ENST00000505315 MT1MQ8N339 61 aa-0.39□□□□□ -2.47
HMGB1P22-201ENST00000505315 EYSQ5T1H1 3165 aa-0.4□□□□□ -2.47
HMGB1P22-201ENST00000505315 ATMQ13315 3056 aa-0.41□□□□□ -2.47
HMGB1P22-201ENST00000505315 ABCA13Q86UQ4 5058 aa-0.41□□□□□ -2.47
HMGB1P22-201ENST00000505315 VPS13CQ709C8 3753 aa-0.41□□□□□ -2.48
HMGB1P22-201ENST00000505315 LINC01556Q5JQF7 62 aa-0.43□□□□□ -2.48
HMGB1P22-201ENST00000505315 A0A096LPF7 62 aa-0.44□□□□□ -2.48
HMGB1P22-201ENST00000505315 MYO15AQ9UKN7 3530 aa-0.45□□□□□ -2.48
HMGB1P22-201ENST00000505315 FRYLO94915 3013 aa-0.46□□□□□ -2.48
HMGB1P22-201ENST00000505315 DMDP11532 3685 aa-0.48□□□□□ -2.49
HMGB1P22-201ENST00000505315 DNAH12Q6ZR08 3092 aa-0.51□□□□□ -2.49
HMGB1P22-201ENST00000505315 BOD1L1Q8NFC6 3051 aa-0.52□□□□□ -2.49
HMGB1P22-201ENST00000505315 WDFY4Q6ZS81 3184 aa-0.52□□□□□ -2.49
HMGB1P22-201ENST00000505315 PCNTO95613 3336 aa-0.54□□□□□ -2.5
HMGB1P22-201ENST00000505315 KRTAP20-1Q3LI63 56 aa-0.55□□□□□ -2.5
HMGB1P22-201ENST00000505315 FREM2Q5SZK8 3169 aa-0.55□□□□□ -2.5
HMGB1P22-201ENST00000505315 WDFY3Q8IZQ1 3526 aa-0.55□□□□□ -2.5
HMGB1P22-201ENST00000505315 CEP350Q5VT06 3117 aa-0.58□□□□□ -2.5
HMGB1P22-201ENST00000505315 CENPEQ02224 2701 aa-0.58□□□□□ -2.5
HMGB1P22-201ENST00000505315 MT1BP07438 61 aa-0.58□□□□□ -2.5
HMGB1P22-201ENST00000505315 SZT2Q5T011 3432 aa-0.58□□□□□ -2.5
HMGB1P22-201ENST00000505315 MKI67P46013 3256 aaKnown RBP-0.59□□□□□ -2.5
HMGB1P22-201ENST00000505315 KRTAP19-6Q3LI70 58 aa-0.59□□□□□ -2.5
HMGB1P22-201ENST00000505315 MUC3AQ02505 3323 aa-0.59□□□□□ -2.5
HMGB1P22-201ENST00000505315 XIRP2A4UGR9 3374 aa-0.61□□□□□ -2.51
HMGB1P22-201ENST00000505315 SPEGQ15772 3267 aa-0.63□□□□□ -2.51
HMGB1P22-201ENST00000505315 Q9Y3F1 56 aa-0.64□□□□□ -2.51
HMGB1P22-201ENST00000505315 USP34Q70CQ2 3546 aa-0.65□□□□□ -2.51
HMGB1P22-201ENST00000505315 HTN3P15516 51 aa-0.65□□□□□ -2.51
HMGB1P22-201ENST00000505315 DNAH14Q0VDD8 3507 aa-0.65□□□□□ -2.51
HMGB1P22-201ENST00000505315 DCHS1Q96JQ0 3298 aa-0.67□□□□□ -2.52
HMGB1P22-201ENST00000505315 UNC80Q8N2C7 3258 aa-0.67□□□□□ -2.52
HMGB1P22-201ENST00000505315 MT1FP04733 61 aa-0.67□□□□□ -2.52
HMGB1P22-201ENST00000505315 EP400Q96L91 3159 aa-0.68□□□□□ -2.52
HMGB1P22-201ENST00000505315 DEFB108BQ8NET1 73 aa-0.69□□□□□ -2.52
HMGB1P22-201ENST00000505315 ASPMQ8IZT6 3477 aa-0.73□□□□□ -2.53
HMGB1P22-201ENST00000505315 LOC400499M0QZD8 3231 aa-0.74□□□□□ -2.53
HMGB1P22-201ENST00000505315 VCANP13611 3396 aa-0.75□□□□□ -2.53
HMGB1P22-201ENST00000505315 CFAP47Q6ZTR5 3102 aa-0.75□□□□□ -2.53
HMGB1P22-201ENST00000505315 KRTAP19-2Q3LHN2 52 aa-0.77□□□□□ -2.53
HMGB1P22-201ENST00000505315 BRCA2P51587 3418 aa-0.79□□□□□ -2.54
HMGB1P22-201ENST00000505315 STATHP02808 62 aa-0.81□□□□□ -2.54
HMGB1P22-201ENST00000505315 CENPFP49454 3210 aa-0.83□□□□□ -2.54
HMGB1P22-201ENST00000505315 COX14Q96I36 57 aa-0.87□□□□□ -2.55
HMGB1P22-201ENST00000505315 CDH23Q9H251 3354 aa-0.87□□□□□ -2.55
HMGB1P22-201ENST00000505315 VPS13AQ96RL7 3174 aa-0.92□□□□□ -2.56
HMGB1P22-201ENST00000505315 UTRNP46939 3433 aa-0.93□□□□□ -2.56
HMGB1P22-201ENST00000505315 GOLGB1Q14789 3259 aaKnown RBP-1.04□□□□□ -2.58
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms