RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CUBNO60494 3623 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 PRM1P04553 51 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2GQ9BYE4 73 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 MUC17Q685J3 4493 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 ATMQ13315 3056 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 LAMA2P24043 3122 aaKnown RBP0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPEGQ15772 3267 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 ACACBO00763 2458 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2BP35325 72 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2AP35326 72 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 UNC80Q8N2C7 3258 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 MGAM2Q2M2H8 2515 aa0.5□□□□□ -2.33
HMGB3P17-201ENST00000504195 MACF1Q9UPN3 7388 aaKnown RBP0.5□□□□□ -2.33
HMGB3P17-201ENST00000504195 LRP1BQ9NZR2 4599 aa0.49□□□□□ -2.33
HMGB3P17-201ENST00000504195 HERC1Q15751 4861 aa0.49□□□□□ -2.33
HMGB3P17-201ENST00000504195 LOC400499M0QZD8 3231 aa0.49□□□□□ -2.33
HMGB3P17-201ENST00000504195 MT1EP04732 61 aa0.49□□□□□ -2.33
HMGB3P17-201ENST00000504195 MUC3AQ02505 3323 aa0.48□□□□□ -2.33
HMGB3P17-201ENST00000504195 FLNBO75369 2602 aaKnown RBP0.48□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2DP22532 72 aa0.48□□□□□ -2.33
HMGB3P17-201ENST00000504195 MT1LQ93083 61 aa0.47□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2FQ96RM1 72 aa0.47□□□□□ -2.33
HMGB3P17-201ENST00000504195 SYNE2Q8WXH0 6885 aaKnown RBP0.46□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP19-8Q3LI54 63 aa0.46□□□□□ -2.34
HMGB3P17-201ENST00000504195 IGSF10Q6WRI0 2623 aa0.46□□□□□ -2.34
HMGB3P17-201ENST00000504195 SPRR2EP22531 72 aa0.45□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
HMGB3P17-201ENST00000504195 ADGRG4Q8IZF6 3080 aa0.45□□□□□ -2.34
HMGB3P17-201ENST00000504195 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 MT1HP80294 61 aa0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 LRP2P98164 4655 aa0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 MAST4O15021 2626 aa0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 MT1XP80297 61 aa0.43□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP19-2Q3LHN2 52 aa0.43□□□□□ -2.34
HMGB3P17-201ENST00000504195 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
HMGB3P17-201ENST00000504195 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
HMGB3P17-201ENST00000504195 CDH23Q9H251 3354 aa0.42□□□□□ -2.34
HMGB3P17-201ENST00000504195 DNHD1Q96M86 4753 aa0.42□□□□□ -2.34
HMGB3P17-201ENST00000504195 EYSQ5T1H1 3165 aa0.41□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
HMGB3P17-201ENST00000504195 HYDINQ4G0P3 5121 aa0.4□□□□□ -2.35
HMGB3P17-201ENST00000504195 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.35
HMGB3P17-201ENST00000504195 KRTAP19-7Q3SYF9 63 aa0.38□□□□□ -2.35
HMGB3P17-201ENST00000504195 KMT2DO14686 5537 aa0.37□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT1BP07438 61 aa0.37□□□□□ -2.35
HMGB3P17-201ENST00000504195 MUC2Q02817 5179 aa0.37□□□□□ -2.35
HMGB3P17-201ENST00000504195 RYR3Q15413 4870 aa0.36□□□□□ -2.35
HMGB3P17-201ENST00000504195 BIRC6Q9NR09 4857 aa0.36□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT2AP02795 61 aa0.36□□□□□ -2.35
HMGB3P17-201ENST00000504195 HERC2O95714 4834 aa0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 USH2AO75445 5202 aa0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT1GP13640 62 aa0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT1MQ8N339 61 aa0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 KMT2CQ8NEZ4 4911 aaKnown RBP0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT1HL1P0DM35 61 aa0.34□□□□□ -2.36
HMGB3P17-201ENST00000504195 SSPOA2VEC9 5147 aa0.34□□□□□ -2.36
HMGB3P17-201ENST00000504195 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
HMGB3P17-201ENST00000504195 RNF213Q63HN8 5207 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 PCLOQ9Y6V0 5065 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 FAT4Q6V0I7 4981 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 UBR4Q5T4S7 5183 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 RYR1P21817 5038 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 MT1FP04733 61 aa0.32□□□□□ -2.36
HMGB3P17-201ENST00000504195 KRTAP6-1Q3LI64 71 aa0.3□□□□□ -2.36
HMGB3P17-201ENST00000504195 EPPK1P58107 5090 aaKnown RBP0.3□□□□□ -2.36
HMGB3P17-201ENST00000504195 ABCA13Q86UQ4 5058 aa0.29□□□□□ -2.36
HMGB3P17-201ENST00000504195 RYR2Q92736 4967 aa0.28□□□□□ -2.36
HMGB3P17-201ENST00000504195 KIAA1109Q2LD37 5005 aa0.27□□□□□ -2.37
HMGB3P17-201ENST00000504195 DSTQ03001 7570 aaKnown RBP0.23□□□□□ -2.37
HMGB3P17-201ENST00000504195 MUC12Q9UKN1 5478 aa0.21□□□□□ -2.38
HMGB3P17-201ENST00000504195 NEBP20929 6669 aa0.2□□□□□ -2.38
HMGB3P17-201ENST00000504195 KRTAP19-6Q3LI70 58 aa0.18□□□□□ -2.38
HMGB3P17-201ENST00000504195 PHGR1C9JFL3 82 aa0.17□□□□□ -2.38
HMGB3P17-201ENST00000504195 MT4P47944 62 aa0.12□□□□□ -2.39
HMGB3P17-201ENST00000504195 KRTAP20-2Q3LI61 65 aa0.11□□□□□ -2.39
HMGB3P17-201ENST00000504195 KRTAP20-1Q3LI63 56 aa0.08□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms