RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CUBNO60494 3623 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 PRM1P04553 51 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2GQ9BYE4 73 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 MUC17Q685J3 4493 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 ATMQ13315 3056 aa0.52□□□□□ -2.33
HMGB3P17-201ENST00000504195 LAMA2P24043 3122 aaKnown RBP0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPEGQ15772 3267 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 ACACBO00763 2458 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2BP35325 72 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2AP35326 72 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 UNC80Q8N2C7 3258 aa0.51□□□□□ -2.33
HMGB3P17-201ENST00000504195 MGAM2Q2M2H8 2515 aa0.5□□□□□ -2.33
HMGB3P17-201ENST00000504195 MACF1Q9UPN3 7388 aaKnown RBP0.5□□□□□ -2.33
HMGB3P17-201ENST00000504195 LRP1BQ9NZR2 4599 aa0.49□□□□□ -2.33
HMGB3P17-201ENST00000504195 HERC1Q15751 4861 aa0.49□□□□□ -2.33
HMGB3P17-201ENST00000504195 LOC400499M0QZD8 3231 aa0.49□□□□□ -2.33
HMGB3P17-201ENST00000504195 MT1EP04732 61 aa0.49□□□□□ -2.33
HMGB3P17-201ENST00000504195 MUC3AQ02505 3323 aa0.48□□□□□ -2.33
HMGB3P17-201ENST00000504195 FLNBO75369 2602 aaKnown RBP0.48□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2DP22532 72 aa0.48□□□□□ -2.33
HMGB3P17-201ENST00000504195 MT1LQ93083 61 aa0.47□□□□□ -2.33
HMGB3P17-201ENST00000504195 SPRR2FQ96RM1 72 aa0.47□□□□□ -2.33
HMGB3P17-201ENST00000504195 SYNE2Q8WXH0 6885 aaKnown RBP0.46□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP19-8Q3LI54 63 aa0.46□□□□□ -2.34
HMGB3P17-201ENST00000504195 IGSF10Q6WRI0 2623 aa0.46□□□□□ -2.34
HMGB3P17-201ENST00000504195 SPRR2EP22531 72 aa0.45□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
HMGB3P17-201ENST00000504195 ADGRG4Q8IZF6 3080 aa0.45□□□□□ -2.34
HMGB3P17-201ENST00000504195 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 MT1HP80294 61 aa0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 LRP2P98164 4655 aa0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 MAST4O15021 2626 aa0.44□□□□□ -2.34
HMGB3P17-201ENST00000504195 MT1XP80297 61 aa0.43□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP19-2Q3LHN2 52 aa0.43□□□□□ -2.34
HMGB3P17-201ENST00000504195 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
HMGB3P17-201ENST00000504195 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
HMGB3P17-201ENST00000504195 CDH23Q9H251 3354 aa0.42□□□□□ -2.34
HMGB3P17-201ENST00000504195 DNHD1Q96M86 4753 aa0.42□□□□□ -2.34
HMGB3P17-201ENST00000504195 EYSQ5T1H1 3165 aa0.41□□□□□ -2.34
HMGB3P17-201ENST00000504195 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
HMGB3P17-201ENST00000504195 HYDINQ4G0P3 5121 aa0.4□□□□□ -2.35
HMGB3P17-201ENST00000504195 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.35
HMGB3P17-201ENST00000504195 KRTAP19-7Q3SYF9 63 aa0.38□□□□□ -2.35
HMGB3P17-201ENST00000504195 KMT2DO14686 5537 aa0.37□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT1BP07438 61 aa0.37□□□□□ -2.35
HMGB3P17-201ENST00000504195 MUC2Q02817 5179 aa0.37□□□□□ -2.35
HMGB3P17-201ENST00000504195 RYR3Q15413 4870 aa0.36□□□□□ -2.35
HMGB3P17-201ENST00000504195 BIRC6Q9NR09 4857 aa0.36□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT2AP02795 61 aa0.36□□□□□ -2.35
HMGB3P17-201ENST00000504195 HERC2O95714 4834 aa0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 USH2AO75445 5202 aa0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT1GP13640 62 aa0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT1MQ8N339 61 aa0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 KMT2CQ8NEZ4 4911 aaKnown RBP0.35□□□□□ -2.35
HMGB3P17-201ENST00000504195 MT1HL1P0DM35 61 aa0.34□□□□□ -2.36
HMGB3P17-201ENST00000504195 SSPOA2VEC9 5147 aa0.34□□□□□ -2.36
HMGB3P17-201ENST00000504195 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
HMGB3P17-201ENST00000504195 RNF213Q63HN8 5207 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 PCLOQ9Y6V0 5065 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 FAT4Q6V0I7 4981 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 UBR4Q5T4S7 5183 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 RYR1P21817 5038 aa0.33□□□□□ -2.36
HMGB3P17-201ENST00000504195 MT1FP04733 61 aa0.32□□□□□ -2.36
HMGB3P17-201ENST00000504195 KRTAP6-1Q3LI64 71 aa0.3□□□□□ -2.36
HMGB3P17-201ENST00000504195 EPPK1P58107 5090 aaKnown RBP0.3□□□□□ -2.36
HMGB3P17-201ENST00000504195 ABCA13Q86UQ4 5058 aa0.29□□□□□ -2.36
HMGB3P17-201ENST00000504195 RYR2Q92736 4967 aa0.28□□□□□ -2.36
HMGB3P17-201ENST00000504195 KIAA1109Q2LD37 5005 aa0.27□□□□□ -2.37
HMGB3P17-201ENST00000504195 DSTQ03001 7570 aaKnown RBP0.23□□□□□ -2.37
HMGB3P17-201ENST00000504195 MUC12Q9UKN1 5478 aa0.21□□□□□ -2.38
HMGB3P17-201ENST00000504195 NEBP20929 6669 aa0.2□□□□□ -2.38
HMGB3P17-201ENST00000504195 KRTAP19-6Q3LI70 58 aa0.18□□□□□ -2.38
HMGB3P17-201ENST00000504195 PHGR1C9JFL3 82 aa0.17□□□□□ -2.38
HMGB3P17-201ENST00000504195 MT4P47944 62 aa0.12□□□□□ -2.39
HMGB3P17-201ENST00000504195 KRTAP20-2Q3LI61 65 aa0.11□□□□□ -2.39
HMGB3P17-201ENST00000504195 KRTAP20-1Q3LI63 56 aa0.08□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 106.4 ms