RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ABCA13Q86UQ4 5058 aa-0.17□□□□□ -2.44
HMGB1P35-201ENST00000503360 CFAP46Q8IYW2 2715 aa-0.18□□□□□ -2.44
HMGB1P35-201ENST00000503360 TLN1Q9Y490 2541 aaKnown RBP-0.19□□□□□ -2.44
HMGB1P35-201ENST00000503360 KRTAP20-2Q3LI61 65 aa-0.19□□□□□ -2.44
HMGB1P35-201ENST00000503360 LRBAP50851 2863 aa-0.19□□□□□ -2.44
HMGB1P35-201ENST00000503360 DMDP11532 3685 aa-0.19□□□□□ -2.44
HMGB1P35-201ENST00000503360 SRCAPQ6ZRS2 3230 aa-0.2□□□□□ -2.44
HMGB1P35-201ENST00000503360 DEFB104AQ8WTQ1 72 aa-0.2□□□□□ -2.44
HMGB1P35-201ENST00000503360 CFAP54Q96N23 3096 aa-0.21□□□□□ -2.44
HMGB1P35-201ENST00000503360 K7EIM0 57 aa-0.21□□□□□ -2.44
HMGB1P35-201ENST00000503360 NIPBLQ6KC79 2804 aaeCLIP-0.22□□□□□ -2.44
HMGB1P35-201ENST00000503360 PRCDQ00LT1 54 aa-0.22□□□□□ -2.44
HMGB1P35-201ENST00000503360 ATMQ13315 3056 aa-0.22□□□□□ -2.45
HMGB1P35-201ENST00000503360 MYO15AQ9UKN7 3530 aa-0.23□□□□□ -2.45
HMGB1P35-201ENST00000503360 EYSQ5T1H1 3165 aa-0.24□□□□□ -2.45
HMGB1P35-201ENST00000503360 DEFB4AO15263 64 aa-0.24□□□□□ -2.45
HMGB1P35-201ENST00000503360 CEP295Q9C0D2 2601 aa-0.25□□□□□ -2.45
HMGB1P35-201ENST00000503360 ITPR2Q14571 2701 aa-0.25□□□□□ -2.45
HMGB1P35-201ENST00000503360 A0A096LNI7 61 aa-0.26□□□□□ -2.45
HMGB1P35-201ENST00000503360 BOD1L1Q8NFC6 3051 aa-0.26□□□□□ -2.45
HMGB1P35-201ENST00000503360 SZT2Q5T011 3432 aa-0.26□□□□□ -2.45
HMGB1P35-201ENST00000503360 H3BUX3 64 aa-0.27□□□□□ -2.45
HMGB1P35-201ENST00000503360 MT1HL1P0DM35 61 aa-0.27□□□□□ -2.45
HMGB1P35-201ENST00000503360 XIRP2A4UGR9 3374 aa-0.28□□□□□ -2.45
HMGB1P35-201ENST00000503360 MUC3AQ02505 3323 aa-0.28□□□□□ -2.45
HMGB1P35-201ENST00000503360 FREM2Q5SZK8 3169 aa-0.28□□□□□ -2.45
HMGB1P35-201ENST00000503360 PRUNE2Q8WUY3 3088 aa-0.28□□□□□ -2.45
HMGB1P35-201ENST00000503360 MT1GP13640 62 aa-0.28□□□□□ -2.45
HMGB1P35-201ENST00000503360 DEFB133Q30KQ1 61 aa-0.28□□□□□ -2.45
HMGB1P35-201ENST00000503360 TTTY10Q9BZA0 68 aa-0.28□□□□□ -2.45
HMGB1P35-201ENST00000503360 WDFY4Q6ZS81 3184 aa-0.29□□□□□ -2.46
HMGB1P35-201ENST00000503360 MT1MQ8N339 61 aa-0.29□□□□□ -2.46
HMGB1P35-201ENST00000503360 DEFB124Q8NES8 71 aa-0.29□□□□□ -2.46
HMGB1P35-201ENST00000503360 FRYLO94915 3013 aa-0.29□□□□□ -2.46
HMGB1P35-201ENST00000503360 MT2AP02795 61 aa-0.3□□□□□ -2.46
HMGB1P35-201ENST00000503360 HTN1P15515 57 aa-0.3□□□□□ -2.46
HMGB1P35-201ENST00000503360 KRTAP20-1Q3LI63 56 aa-0.31□□□□□ -2.46
HMGB1P35-201ENST00000503360 SPEGQ15772 3267 aa-0.31□□□□□ -2.46
HMGB1P35-201ENST00000503360 PCNTO95613 3336 aa-0.31□□□□□ -2.46
HMGB1P35-201ENST00000503360 TMEM167AQ8TBQ9 72 aa-0.32□□□□□ -2.46
HMGB1P35-201ENST00000503360 EP400Q96L91 3159 aa-0.33□□□□□ -2.46
HMGB1P35-201ENST00000503360 WDFY3Q8IZQ1 3526 aa-0.33□□□□□ -2.46
HMGB1P35-201ENST00000503360 DNAH12Q6ZR08 3092 aa-0.33□□□□□ -2.46
HMGB1P35-201ENST00000503360 RPS29P62273 56 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P35-201ENST00000503360 MKI67P46013 3256 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P35-201ENST00000503360 DCHS1Q96JQ0 3298 aa-0.33□□□□□ -2.46
HMGB1P35-201ENST00000503360 H3BSH0 61 aa-0.34□□□□□ -2.46
HMGB1P35-201ENST00000503360 CD52P31358 61 aa-0.34□□□□□ -2.46
HMGB1P35-201ENST00000503360 VCANP13611 3396 aa-0.34□□□□□ -2.46
HMGB1P35-201ENST00000503360 CEP350Q5VT06 3117 aa-0.35□□□□□ -2.46
HMGB1P35-201ENST00000503360 CFAP47Q6ZTR5 3102 aa-0.35□□□□□ -2.47
HMGB1P35-201ENST00000503360 LOC400499M0QZD8 3231 aa-0.36□□□□□ -2.47
HMGB1P35-201ENST00000503360 CENPFP49454 3210 aa-0.36□□□□□ -2.47
HMGB1P35-201ENST00000503360 DNAH14Q0VDD8 3507 aa-0.38□□□□□ -2.47
HMGB1P35-201ENST00000503360 USP34Q70CQ2 3546 aa-0.38□□□□□ -2.47
HMGB1P35-201ENST00000503360 KRTAP19-6Q3LI70 58 aa-0.38□□□□□ -2.47
HMGB1P35-201ENST00000503360 CENPEQ02224 2701 aa-0.38□□□□□ -2.47
HMGB1P35-201ENST00000503360 UNC80Q8N2C7 3258 aa-0.39□□□□□ -2.47
HMGB1P35-201ENST00000503360 ASPMQ8IZT6 3477 aa-0.39□□□□□ -2.47
HMGB1P35-201ENST00000503360 MT1BP07438 61 aa-0.39□□□□□ -2.47
HMGB1P35-201ENST00000503360 RPL39P5Q59GN2 51 aa-0.4□□□□□ -2.47
HMGB1P35-201ENST00000503360 VPS13AQ96RL7 3174 aa-0.41□□□□□ -2.47
HMGB1P35-201ENST00000503360 CDH23Q9H251 3354 aa-0.41□□□□□ -2.47
HMGB1P35-201ENST00000503360 BRCA2P51587 3418 aa-0.43□□□□□ -2.48
HMGB1P35-201ENST00000503360 DEFB108AA8MXU0 73 aa-0.44□□□□□ -2.48
HMGB1P35-201ENST00000503360 MT1FP04733 61 aa-0.45□□□□□ -2.48
HMGB1P35-201ENST00000503360 UTRNP46939 3433 aa-0.45□□□□□ -2.48
HMGB1P35-201ENST00000503360 GOLGB1Q14789 3259 aaKnown RBP-0.45□□□□□ -2.48
HMGB1P35-201ENST00000503360 KRTAP19-2Q3LHN2 52 aa-0.48□□□□□ -2.49
HMGB1P35-201ENST00000503360 LINC01556Q5JQF7 62 aa-0.48□□□□□ -2.49
HMGB1P35-201ENST00000503360 APELAP0DMC3 54 aa-0.5□□□□□ -2.49
HMGB1P35-201ENST00000503360 A0A096LPF7 62 aa-0.54□□□□□ -2.5
HMGB1P35-201ENST00000503360 Q9Y3F1 56 aa-0.55□□□□□ -2.5
HMGB1P35-201ENST00000503360 HTN3P15516 51 aa-0.67□□□□□ -2.52
HMGB1P35-201ENST00000503360 DEFB108BQ8NET1 73 aa-0.69□□□□□ -2.52
HMGB1P35-201ENST00000503360 COX14Q96I36 57 aa-0.71□□□□□ -2.52
HMGB1P35-201ENST00000503360 STATHP02808 62 aa-0.77□□□□□ -2.53
Retrieved 77 of 20,778 RNA–protein pairs in 265.2 ms