RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 KRTAP5-4Q6L8H1 288 aa6.79□□□□□ -1.32
SFXN1-203ENST00000502393 ATP5EP56381 51 aaPredicted RBP6.77□□□□□ -1.33
SFXN1-203ENST00000502393 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
SFXN1-203ENST00000502393 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
SFXN1-203ENST00000502393 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
SFXN1-203ENST00000502393 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
SFXN1-203ENST00000502393 KRTAP4-7Q9BYR0 210 aa6.63□□□□□ -1.35
SFXN1-203ENST00000502393 UQCR11O14957 56 aa6.62□□□□□ -1.35
SFXN1-203ENST00000502393 AHNAK2Q8IVF2 5795 aa6.57□□□□□ -1.36
SFXN1-203ENST00000502393 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
SFXN1-203ENST00000502393 TMEM258P61165 79 aa6.51□□□□□ -1.37
SFXN1-203ENST00000502393 KRTAP25-1Q3LHN0 102 aa6.49□□□□□ -1.37
SFXN1-203ENST00000502393 KRTAP5-5Q701N2 237 aaPredicted RBP6.46□□□□□ -1.38
SFXN1-203ENST00000502393 MIR22HGQ0VDD5 57 aa6.43□□□□□ -1.38
SFXN1-203ENST00000502393 KRTAP20-2Q3LI61 65 aa6.41□□□□□ -1.38
SFXN1-203ENST00000502393 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
SFXN1-203ENST00000502393 K7ERS5 55 aa6.37□□□□□ -1.39
SFXN1-203ENST00000502393 KRTAP5-3Q6L8H2 238 aa6.37□□□□□ -1.39
SFXN1-203ENST00000502393 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
SFXN1-203ENST00000502393 KRTAP12-4P60329 112 aa6.34□□□□□ -1.39
SFXN1-203ENST00000502393 KRTAP5-7Q6L8G8 165 aa6.33□□□□□ -1.4
SFXN1-203ENST00000502393 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
SFXN1-203ENST00000502393 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
SFXN1-203ENST00000502393 V9GYY9 64 aa6.23□□□□□ -1.41
SFXN1-203ENST00000502393 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
SFXN1-203ENST00000502393 PSPHP1O15172 72 aa6.2□□□□□ -1.42
SFXN1-203ENST00000502393 SYNE1Q8NF91 8797 aaKnown RBP6.18□□□□□ -1.42
SFXN1-203ENST00000502393 Q1T7F1 81 aa6.16□□□□□ -1.42
SFXN1-203ENST00000502393 LCE3CQ5T5A8 94 aa6.15□□□□□ -1.42
SFXN1-203ENST00000502393 A6NED7 52 aa5.99□□□□□ -1.45
SFXN1-203ENST00000502393 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
SFXN1-203ENST00000502393 MT1AP04731 61 aa5.96□□□□□ -1.46
SFXN1-203ENST00000502393 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
SFXN1-203ENST00000502393 KRTAP5-2Q701N4 177 aa5.91□□□□□ -1.46
SFXN1-203ENST00000502393 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
SFXN1-203ENST00000502393 ROMO1P60602 79 aa5.89□□□□□ -1.47
SFXN1-203ENST00000502393 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
SFXN1-203ENST00000502393 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
SFXN1-203ENST00000502393 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
SFXN1-203ENST00000502393 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
SFXN1-203ENST00000502393 KRTAP5-8O75690 187 aa5.69□□□□□ -1.5
SFXN1-203ENST00000502393 OBSCNQ5VST9 7968 aa5.57□□□□□ -1.52
SFXN1-203ENST00000502393 MT3P25713 68 aa5.48□□□□□ -1.53
SFXN1-203ENST00000502393 MUC5ACP98088 5654 aa5.46□□□□□ -1.53
SFXN1-203ENST00000502393 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
SFXN1-203ENST00000502393 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
SFXN1-203ENST00000502393 AHNAKQ09666 5890 aaKnown RBP5.41□□□□□ -1.54
SFXN1-203ENST00000502393 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
SFXN1-203ENST00000502393 PCP4P48539 62 aa5.33□□□□□ -1.56
SFXN1-203ENST00000502393 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
SFXN1-203ENST00000502393 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
SFXN1-203ENST00000502393 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
SFXN1-203ENST00000502393 H3BS24 57 aa4.82□□□□□ -1.64
SFXN1-203ENST00000502393 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
SFXN1-203ENST00000502393 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
SFXN1-203ENST00000502393 LCE1CQ5T751 118 aa4.71□□□□□ -1.66
SFXN1-203ENST00000502393 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
SFXN1-203ENST00000502393 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
SFXN1-203ENST00000502393 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
SFXN1-203ENST00000502393 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
SFXN1-203ENST00000502393 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
SFXN1-203ENST00000502393 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
SFXN1-203ENST00000502393 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
SFXN1-203ENST00000502393 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
SFXN1-203ENST00000502393 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
SFXN1-203ENST00000502393 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
SFXN1-203ENST00000502393 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
SFXN1-203ENST00000502393 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
SFXN1-203ENST00000502393 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
SFXN1-203ENST00000502393 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
SFXN1-203ENST00000502393 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
SFXN1-203ENST00000502393 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
SFXN1-203ENST00000502393 PRM1P04553 51 aa2.99□□□□□ -1.93
SFXN1-203ENST00000502393 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
SFXN1-203ENST00000502393 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
SFXN1-203ENST00000502393 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
SFXN1-203ENST00000502393 INE1O15225 51 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 77.8 ms