RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 KRTAP12-3P60328 96 aa1.66□□□□□ -2.14
CUL3-212ENST00000497715 SMR3BP02814 79 aaPredicted RBP1.66□□□□□ -2.14
CUL3-212ENST00000497715 PCLOQ9Y6V0 5065 aa1.65□□□□□ -2.15
CUL3-212ENST00000497715 UBR4Q5T4S7 5183 aa1.65□□□□□ -2.15
CUL3-212ENST00000497715 PRM1P04553 51 aa1.63□□□□□ -2.15
CUL3-212ENST00000497715 MUC17Q685J3 4493 aa1.6□□□□□ -2.15
CUL3-212ENST00000497715 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
CUL3-212ENST00000497715 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
CUL3-212ENST00000497715 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
CUL3-212ENST00000497715 MUC2Q02817 5179 aa1.53□□□□□ -2.16
CUL3-212ENST00000497715 MT3P25713 68 aa1.51□□□□□ -2.17
CUL3-212ENST00000497715 KRTAP19-5Q3LI72 72 aa1.5□□□□□ -2.17
CUL3-212ENST00000497715 LRP2P98164 4655 aa1.49□□□□□ -2.17
CUL3-212ENST00000497715 NEBP20929 6669 aa1.46□□□□□ -2.18
CUL3-212ENST00000497715 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
CUL3-212ENST00000497715 HERC1Q15751 4861 aa1.45□□□□□ -2.18
CUL3-212ENST00000497715 KRTAP20-1Q3LI63 56 aa1.43□□□□□ -2.18
CUL3-212ENST00000497715 BIRC6Q9NR09 4857 aa1.43□□□□□ -2.18
CUL3-212ENST00000497715 J3QKU1 62 aa1.4□□□□□ -2.18
CUL3-212ENST00000497715 RYR3Q15413 4870 aa1.4□□□□□ -2.19
CUL3-212ENST00000497715 KMT2CQ8NEZ4 4911 aaKnown RBP1.39□□□□□ -2.19
CUL3-212ENST00000497715 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
CUL3-212ENST00000497715 RYR1P21817 5038 aa1.37□□□□□ -2.19
CUL3-212ENST00000497715 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
CUL3-212ENST00000497715 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
CUL3-212ENST00000497715 RYR2Q92736 4967 aa1.35□□□□□ -2.19
CUL3-212ENST00000497715 MT1XP80297 61 aa1.35□□□□□ -2.19
CUL3-212ENST00000497715 SPRR2GQ9BYE4 73 aa1.35□□□□□ -2.19
CUL3-212ENST00000497715 SSPOA2VEC9 5147 aa1.34□□□□□ -2.19
CUL3-212ENST00000497715 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
CUL3-212ENST00000497715 KRTAP19-2Q3LHN2 52 aa1.34□□□□□ -2.2
CUL3-212ENST00000497715 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
CUL3-212ENST00000497715 LCE1BQ5T7P3 118 aa1.33□□□□□ -2.2
CUL3-212ENST00000497715 HYDINQ4G0P3 5121 aa1.33□□□□□ -2.2
CUL3-212ENST00000497715 SYNE2Q8WXH0 6885 aaKnown RBP1.32□□□□□ -2.2
CUL3-212ENST00000497715 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
CUL3-212ENST00000497715 KMT2DO14686 5537 aa1.29□□□□□ -2.2
CUL3-212ENST00000497715 EPPK1P58107 5090 aaKnown RBP1.27□□□□□ -2.21
CUL3-212ENST00000497715 ABCA13Q86UQ4 5058 aa1.27□□□□□ -2.21
CUL3-212ENST00000497715 HMCN2Q8NDA2 5059 aa1.26□□□□□ -2.21
CUL3-212ENST00000497715 MT1AP04731 61 aa1.26□□□□□ -2.21
CUL3-212ENST00000497715 MT1GP13640 62 aa1.24□□□□□ -2.21
CUL3-212ENST00000497715 RNF213Q63HN8 5207 aa1.24□□□□□ -2.21
CUL3-212ENST00000497715 KRTAP19-3Q7Z4W3 81 aa1.23□□□□□ -2.21
CUL3-212ENST00000497715 HERC2O95714 4834 aa1.22□□□□□ -2.21
CUL3-212ENST00000497715 USH2AO75445 5202 aa1.22□□□□□ -2.21
CUL3-212ENST00000497715 DNHD1Q96M86 4753 aa1.2□□□□□ -2.22
CUL3-212ENST00000497715 MT1BP07438 61 aa1.2□□□□□ -2.22
CUL3-212ENST00000497715 MT1LQ93083 61 aa1.2□□□□□ -2.22
CUL3-212ENST00000497715 KRTAP19-7Q3SYF9 63 aa1.19□□□□□ -2.22
CUL3-212ENST00000497715 FSIP2Q5CZC0 6907 aa1.19□□□□□ -2.22
CUL3-212ENST00000497715 KRTAP19-8Q3LI54 63 aa1.17□□□□□ -2.22
CUL3-212ENST00000497715 FAT4Q6V0I7 4981 aa1.16□□□□□ -2.22
CUL3-212ENST00000497715 MT1HL1P0DM35 61 aa1.16□□□□□ -2.22
CUL3-212ENST00000497715 MT1EP04732 61 aa1.15□□□□□ -2.23
CUL3-212ENST00000497715 SPRR2FQ96RM1 72 aa1.15□□□□□ -2.23
CUL3-212ENST00000497715 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
CUL3-212ENST00000497715 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
CUL3-212ENST00000497715 SPRR2DP22532 72 aa1.14□□□□□ -2.23
CUL3-212ENST00000497715 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
CUL3-212ENST00000497715 MT1FP04733 61 aa1.13□□□□□ -2.23
CUL3-212ENST00000497715 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
CUL3-212ENST00000497715 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
CUL3-212ENST00000497715 MT2AP02795 61 aa1.08□□□□□ -2.24
CUL3-212ENST00000497715 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
CUL3-212ENST00000497715 SPRR2AP35326 72 aa1.06□□□□□ -2.24
CUL3-212ENST00000497715 SPRR2EP22531 72 aa1.05□□□□□ -2.24
CUL3-212ENST00000497715 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
CUL3-212ENST00000497715 SPRR2BP35325 72 aa1.05□□□□□ -2.24
CUL3-212ENST00000497715 MT1HP80294 61 aa0.99□□□□□ -2.25
CUL3-212ENST00000497715 MT1MQ8N339 61 aa0.99□□□□□ -2.25
CUL3-212ENST00000497715 KRTAP21-2Q3LI59 83 aa0.93□□□□□ -2.26
CUL3-212ENST00000497715 MUC12Q9UKN1 5478 aa0.89□□□□□ -2.27
CUL3-212ENST00000497715 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
CUL3-212ENST00000497715 KRTAP19-6Q3LI70 58 aa0.58□□□□□ -2.32
CUL3-212ENST00000497715 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
CUL3-212ENST00000497715 KRTAP20-2Q3LI61 65 aa0.46□□□□□ -2.34
CUL3-212ENST00000497715 MT4P47944 62 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 16.5 ms