RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 BRK1Q8WUW1 75 aa7.62□□□□□ -1.19
CTSD-206ENST00000497544 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
CTSD-206ENST00000497544 ROMO1P60602 79 aa7.55□□□□□ -1.2
CTSD-206ENST00000497544 LCE3AQ5TA76 89 aa7.54□□□□□ -1.2
CTSD-206ENST00000497544 KRTAP19-7Q3SYF9 63 aa7.45□□□□□ -1.22
CTSD-206ENST00000497544 KRTAP19-5Q3LI72 72 aa7.44□□□□□ -1.22
CTSD-206ENST00000497544 AHNAK2Q8IVF2 5795 aa7.42□□□□□ -1.22
CTSD-206ENST00000497544 HMCN1Q96RW7 5635 aa7.42□□□□□ -1.22
CTSD-206ENST00000497544 KRTAP5-10Q6L8G5 202 aa7.39□□□□□ -1.23
CTSD-206ENST00000497544 MT1EP04732 61 aa7.37□□□□□ -1.23
CTSD-206ENST00000497544 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
CTSD-206ENST00000497544 LCE1DQ5T752 114 aa7.34□□□□□ -1.23
CTSD-206ENST00000497544 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
CTSD-206ENST00000497544 KRTAP5-7Q6L8G8 165 aa7.24□□□□□ -1.25
CTSD-206ENST00000497544 PP632Q6XCG6 107 aa7.22□□□□□ -1.25
CTSD-206ENST00000497544 PMAIP1Q13794 54 aa7.21□□□□□ -1.26
CTSD-206ENST00000497544 KRTAP19-3Q7Z4W3 81 aa7.21□□□□□ -1.26
CTSD-206ENST00000497544 LCE5AQ5TCM9 118 aa7.14□□□□□ -1.27
CTSD-206ENST00000497544 MT1LQ93083 61 aa7.14□□□□□ -1.27
CTSD-206ENST00000497544 MT1GP13640 62 aa7.13□□□□□ -1.27
CTSD-206ENST00000497544 PRO0628Q9UI54 55 aa7.12□□□□□ -1.27
CTSD-206ENST00000497544 MT4P47944 62 aa7.1□□□□□ -1.27
CTSD-206ENST00000497544 SPRR5A0A1B0GTR4 108 aa7.07□□□□□ -1.28
CTSD-206ENST00000497544 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
CTSD-206ENST00000497544 MT1MQ8N339 61 aa6.98□□□□□ -1.29
CTSD-206ENST00000497544 LCE4AQ5TA78 99 aa6.97□□□□□ -1.29
CTSD-206ENST00000497544 KRTAP5-3Q6L8H2 238 aa6.94□□□□□ -1.3
CTSD-206ENST00000497544 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
CTSD-206ENST00000497544 KRTAP4-7Q9BYR0 210 aa6.82□□□□□ -1.32
CTSD-206ENST00000497544 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
CTSD-206ENST00000497544 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
CTSD-206ENST00000497544 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
CTSD-206ENST00000497544 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
CTSD-206ENST00000497544 KRTAP5-4Q6L8H1 288 aa6.68□□□□□ -1.34
CTSD-206ENST00000497544 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
CTSD-206ENST00000497544 AHNAKQ09666 5890 aaKnown RBP6.46□□□□□ -1.38
CTSD-206ENST00000497544 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
CTSD-206ENST00000497544 KRTAP20-2Q3LI61 65 aa6.38□□□□□ -1.39
CTSD-206ENST00000497544 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
CTSD-206ENST00000497544 MUC5ACP98088 5654 aa6.34□□□□□ -1.39
CTSD-206ENST00000497544 KRTAP5-5Q701N2 237 aaPredicted RBP6.31□□□□□ -1.4
CTSD-206ENST00000497544 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
CTSD-206ENST00000497544 MUC5BQ9HC84 5762 aaPredicted RBP6.24□□□□□ -1.41
CTSD-206ENST00000497544 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
CTSD-206ENST00000497544 MT1AP04731 61 aa6.09□□□□□ -1.43
CTSD-206ENST00000497544 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
CTSD-206ENST00000497544 SYNE1Q8NF91 8797 aaKnown RBP6.05□□□□□ -1.44
CTSD-206ENST00000497544 KRTAP5-8O75690 187 aa6.02□□□□□ -1.45
CTSD-206ENST00000497544 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
CTSD-206ENST00000497544 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
CTSD-206ENST00000497544 KRTAP9-9Q9BYP9 154 aa5.78□□□□□ -1.48
CTSD-206ENST00000497544 LUZP6Q538Z0 58 aa5.69□□□□□ -1.5
CTSD-206ENST00000497544 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
CTSD-206ENST00000497544 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
CTSD-206ENST00000497544 MT3P25713 68 aa5.57□□□□□ -1.52
CTSD-206ENST00000497544 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
CTSD-206ENST00000497544 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
CTSD-206ENST00000497544 NDUFAF8A1L188 74 aa5.08□□□□□ -1.6
CTSD-206ENST00000497544 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
CTSD-206ENST00000497544 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
CTSD-206ENST00000497544 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
CTSD-206ENST00000497544 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
CTSD-206ENST00000497544 KRTAP4-2Q9BYR5 136 aa4.61□□□□□ -1.67
CTSD-206ENST00000497544 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
CTSD-206ENST00000497544 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
CTSD-206ENST00000497544 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
CTSD-206ENST00000497544 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
CTSD-206ENST00000497544 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
CTSD-206ENST00000497544 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
CTSD-206ENST00000497544 INE1O15225 51 aa4.18□□□□□ -1.74
CTSD-206ENST00000497544 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
CTSD-206ENST00000497544 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
CTSD-206ENST00000497544 PRM1P04553 51 aa3.89□□□□□ -1.79
CTSD-206ENST00000497544 H3BS24 57 aa3.74□□□□□ -1.81
CTSD-206ENST00000497544 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
CTSD-206ENST00000497544 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
CTSD-206ENST00000497544 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
CTSD-206ENST00000497544 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 452.5 ms