RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
UBP1-213ENST00000496310 TRAV7A0A075B6U4 112 aa2.34□□□□□ -2.03
UBP1-213ENST00000496310 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
UBP1-213ENST00000496310 LCE3AQ5TA76 89 aa2.34□□□□□ -2.03
UBP1-213ENST00000496310 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
UBP1-213ENST00000496310 ACYP2P14621 99 aa2.32□□□□□ -2.04
UBP1-213ENST00000496310 SPINT4Q6UDR6 99 aa2.32□□□□□ -2.04
UBP1-213ENST00000496310 SPTSSBQ8NFR3 76 aa2.31□□□□□ -2.04
UBP1-213ENST00000496310 CHKB-CPT1BH3BT56 60 aa2.3□□□□□ -2.04
UBP1-213ENST00000496310 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
UBP1-213ENST00000496310 SCGB1A1P11684 91 aa2.3□□□□□ -2.04
UBP1-213ENST00000496310 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
UBP1-213ENST00000496310 NDUFAF8A1L188 74 aa2.28□□□□□ -2.04
UBP1-213ENST00000496310 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
UBP1-213ENST00000496310 SPATA8Q6RVD6 105 aa2.28□□□□□ -2.04
UBP1-213ENST00000496310 H3BPC8 53 aa2.27□□□□□ -2.05
UBP1-213ENST00000496310 SMIM20Q8N5G0 67 aa2.27□□□□□ -2.05
UBP1-213ENST00000496310 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
UBP1-213ENST00000496310 LCE3CQ5T5A8 94 aa2.25□□□□□ -2.05
UBP1-213ENST00000496310 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
UBP1-213ENST00000496310 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
UBP1-213ENST00000496310 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
UBP1-213ENST00000496310 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
UBP1-213ENST00000496310 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
UBP1-213ENST00000496310 SERP2Q8N6R1 65 aa2.2□□□□□ -2.06
UBP1-213ENST00000496310 ANAPC13Q9BS18 74 aa2.2□□□□□ -2.06
UBP1-213ENST00000496310 TNP1P09430 55 aa2.19□□□□□ -2.06
UBP1-213ENST00000496310 COX7CP15954 63 aa2.17□□□□□ -2.06
UBP1-213ENST00000496310 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
UBP1-213ENST00000496310 SNURFQ9Y675 71 aa2.15□□□□□ -2.07
UBP1-213ENST00000496310 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.07
UBP1-213ENST00000496310 A0A1B0GU33 70 aa2.14□□□□□ -2.07
UBP1-213ENST00000496310 A8MU10 97 aa2.14□□□□□ -2.07
UBP1-213ENST00000496310 SERP1Q9Y6X1 66 aa2.13□□□□□ -2.07
UBP1-213ENST00000496310 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
UBP1-213ENST00000496310 CCDC179H3BU77 68 aa2.11□□□□□ -2.07
UBP1-213ENST00000496310 SEC61GP60059 68 aa2.11□□□□□ -2.07
UBP1-213ENST00000496310 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
UBP1-213ENST00000496310 ATP5EP56381 51 aaPredicted RBP2.1□□□□□ -2.07
UBP1-213ENST00000496310 SPANXA2-OT1Q8N9U9 137 aa2.1□□□□□ -2.07
UBP1-213ENST00000496310 MT1AP04731 61 aa2.09□□□□□ -2.07
UBP1-213ENST00000496310 COA5Q86WW8 74 aa2.08□□□□□ -2.08
UBP1-213ENST00000496310 KRTAP9-6A8MVA2 160 aa2.07□□□□□ -2.08
UBP1-213ENST00000496310 H7BZZ5 65 aa2.07□□□□□ -2.08
UBP1-213ENST00000496310 TMEM258P61165 79 aa2.07□□□□□ -2.08
UBP1-213ENST00000496310 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
UBP1-213ENST00000496310 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
UBP1-213ENST00000496310 SMIM26A0A096LP01 95 aa2.04□□□□□ -2.08
UBP1-213ENST00000496310 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
UBP1-213ENST00000496310 PRR15LQ9BU68 103 aa1.99□□□□□ -2.09
UBP1-213ENST00000496310 V9GYY9 64 aa1.98□□□□□ -2.09
UBP1-213ENST00000496310 RPS28P62857 69 aaKnown RBP1.97□□□□□ -2.09
UBP1-213ENST00000496310 A0A1B0GU69 56 aa1.96□□□□□ -2.1
UBP1-213ENST00000496310 LINC01558Q9Y6Z2 57 aa1.93□□□□□ -2.1
UBP1-213ENST00000496310 Q1T7F1 81 aa1.92□□□□□ -2.1
UBP1-213ENST00000496310 UQCR11O14957 56 aa1.89□□□□□ -2.11
UBP1-213ENST00000496310 PSPHP1O15172 72 aa1.89□□□□□ -2.11
UBP1-213ENST00000496310 A6NED7 52 aa1.87□□□□□ -2.11
UBP1-213ENST00000496310 K7ERS5 55 aa1.86□□□□□ -2.11
UBP1-213ENST00000496310 MIR22HGQ0VDD5 57 aa1.85□□□□□ -2.11
UBP1-213ENST00000496310 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
UBP1-213ENST00000496310 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
UBP1-213ENST00000496310 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
UBP1-213ENST00000496310 BRK1Q8WUW1 75 aa1.78□□□□□ -2.12
UBP1-213ENST00000496310 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
UBP1-213ENST00000496310 ROMO1P60602 79 aa1.7□□□□□ -2.14
UBP1-213ENST00000496310 PMAIP1Q13794 54 aa1.7□□□□□ -2.14
UBP1-213ENST00000496310 PRO0628Q9UI54 55 aa1.7□□□□□ -2.14
UBP1-213ENST00000496310 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
UBP1-213ENST00000496310 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
UBP1-213ENST00000496310 KTN1-AS1Q86SY8 53 aa1.59□□□□□ -2.15
UBP1-213ENST00000496310 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
UBP1-213ENST00000496310 LUZP6Q538Z0 58 aa1.38□□□□□ -2.19
UBP1-213ENST00000496310 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
UBP1-213ENST00000496310 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
UBP1-213ENST00000496310 INE1O15225 51 aa1.04□□□□□ -2.24
UBP1-213ENST00000496310 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
UBP1-213ENST00000496310 PRM1P04553 51 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 245.7 ms