RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 KRTAP4-3Q9BYR4 195 aa5.97□□□□□ -1.45
CTNS-207ENST00000495445 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
CTNS-207ENST00000495445 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
CTNS-207ENST00000495445 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
CTNS-207ENST00000495445 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
CTNS-207ENST00000495445 Q1T7F1 81 aa5.89□□□□□ -1.47
CTNS-207ENST00000495445 V9GYY9 64 aa5.89□□□□□ -1.47
CTNS-207ENST00000495445 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
CTNS-207ENST00000495445 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
CTNS-207ENST00000495445 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
CTNS-207ENST00000495445 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
CTNS-207ENST00000495445 PSPHP1O15172 72 aa5.84□□□□□ -1.47
CTNS-207ENST00000495445 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
CTNS-207ENST00000495445 K7ERS5 55 aa5.81□□□□□ -1.48
CTNS-207ENST00000495445 MT4P47944 62 aa5.81□□□□□ -1.48
CTNS-207ENST00000495445 PCP4P48539 62 aa5.77□□□□□ -1.49
CTNS-207ENST00000495445 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
CTNS-207ENST00000495445 KRTAP4-6Q9BYQ5 205 aa5.71□□□□□ -1.5
CTNS-207ENST00000495445 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
CTNS-207ENST00000495445 KRTAP5-5Q701N2 237 aaPredicted RBP5.66□□□□□ -1.5
CTNS-207ENST00000495445 AHNAK2Q8IVF2 5795 aa5.65□□□□□ -1.51
CTNS-207ENST00000495445 A6NED7 52 aa5.63□□□□□ -1.51
CTNS-207ENST00000495445 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
CTNS-207ENST00000495445 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
CTNS-207ENST00000495445 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
CTNS-207ENST00000495445 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
CTNS-207ENST00000495445 KRTAP5-10Q6L8G5 202 aa5.51□□□□□ -1.53
CTNS-207ENST00000495445 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
CTNS-207ENST00000495445 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
CTNS-207ENST00000495445 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
CTNS-207ENST00000495445 ROMO1P60602 79 aa5.47□□□□□ -1.53
CTNS-207ENST00000495445 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.54
CTNS-207ENST00000495445 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
CTNS-207ENST00000495445 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
CTNS-207ENST00000495445 KRTAP5-7Q6L8G8 165 aa5.29□□□□□ -1.56
CTNS-207ENST00000495445 MT1AP04731 61 aa5.24□□□□□ -1.57
CTNS-207ENST00000495445 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
CTNS-207ENST00000495445 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
CTNS-207ENST00000495445 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
CTNS-207ENST00000495445 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
CTNS-207ENST00000495445 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
CTNS-207ENST00000495445 BRK1Q8WUW1 75 aa4.97□□□□□ -1.61
CTNS-207ENST00000495445 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
CTNS-207ENST00000495445 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
CTNS-207ENST00000495445 MT3P25713 68 aa4.79□□□□□ -1.64
CTNS-207ENST00000495445 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
CTNS-207ENST00000495445 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
CTNS-207ENST00000495445 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
CTNS-207ENST00000495445 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
CTNS-207ENST00000495445 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
CTNS-207ENST00000495445 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
CTNS-207ENST00000495445 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
CTNS-207ENST00000495445 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
CTNS-207ENST00000495445 PRO0628Q9UI54 55 aa4.5□□□□□ -1.69
CTNS-207ENST00000495445 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
CTNS-207ENST00000495445 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
CTNS-207ENST00000495445 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
CTNS-207ENST00000495445 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
CTNS-207ENST00000495445 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
CTNS-207ENST00000495445 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
CTNS-207ENST00000495445 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
CTNS-207ENST00000495445 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
CTNS-207ENST00000495445 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
CTNS-207ENST00000495445 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
CTNS-207ENST00000495445 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
CTNS-207ENST00000495445 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
CTNS-207ENST00000495445 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
CTNS-207ENST00000495445 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
CTNS-207ENST00000495445 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
CTNS-207ENST00000495445 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
CTNS-207ENST00000495445 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
CTNS-207ENST00000495445 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
CTNS-207ENST00000495445 PRM1P04553 51 aa2.78□□□□□ -1.96
CTNS-207ENST00000495445 A0A0A0MQY5 61 aa2.56□□□□□ -2
CTNS-207ENST00000495445 INE1O15225 51 aa2.54□□□□□ -2
CTNS-207ENST00000495445 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
CTNS-207ENST00000495445 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
CTNS-207ENST00000495445 H3BS24 57 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 74.2 ms