RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 Q1T7F1 81 aa6.28□□□□□ -1.4
HDAC4-211ENST00000494800 MT1LQ93083 61 aa6.28□□□□□ -1.4
HDAC4-211ENST00000494800 PSPHP1O15172 72 aa6.27□□□□□ -1.41
HDAC4-211ENST00000494800 MT1MQ8N339 61 aa6.23□□□□□ -1.41
HDAC4-211ENST00000494800 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
HDAC4-211ENST00000494800 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
HDAC4-211ENST00000494800 A6NED7 52 aa6.12□□□□□ -1.43
HDAC4-211ENST00000494800 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
HDAC4-211ENST00000494800 KRTAP4-6Q9BYQ5 205 aa6.1□□□□□ -1.43
HDAC4-211ENST00000494800 KRTAP4-9Q9BYQ8 210 aa6.08□□□□□ -1.44
HDAC4-211ENST00000494800 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
HDAC4-211ENST00000494800 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
HDAC4-211ENST00000494800 RPS28P62857 69 aaKnown RBP6.02□□□□□ -1.45
HDAC4-211ENST00000494800 PCP4P48539 62 aa5.98□□□□□ -1.45
HDAC4-211ENST00000494800 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
HDAC4-211ENST00000494800 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
HDAC4-211ENST00000494800 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
HDAC4-211ENST00000494800 MT4P47944 62 aa5.93□□□□□ -1.46
HDAC4-211ENST00000494800 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
HDAC4-211ENST00000494800 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
HDAC4-211ENST00000494800 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
HDAC4-211ENST00000494800 GPR98Q8WXG9 6306 aa5.84□□□□□ -1.47
HDAC4-211ENST00000494800 ROMO1P60602 79 aa5.84□□□□□ -1.47
HDAC4-211ENST00000494800 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.47
HDAC4-211ENST00000494800 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
HDAC4-211ENST00000494800 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
HDAC4-211ENST00000494800 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
HDAC4-211ENST00000494800 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
HDAC4-211ENST00000494800 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
HDAC4-211ENST00000494800 AHNAK2Q8IVF2 5795 aa5.56□□□□□ -1.52
HDAC4-211ENST00000494800 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
HDAC4-211ENST00000494800 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
HDAC4-211ENST00000494800 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
HDAC4-211ENST00000494800 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
HDAC4-211ENST00000494800 MT1AP04731 61 aa5.36□□□□□ -1.55
HDAC4-211ENST00000494800 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
HDAC4-211ENST00000494800 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
HDAC4-211ENST00000494800 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
HDAC4-211ENST00000494800 KRTAP5-7Q6L8G8 165 aa5.27□□□□□ -1.57
HDAC4-211ENST00000494800 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
HDAC4-211ENST00000494800 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
HDAC4-211ENST00000494800 KRTAP4-12Q9BQ66 201 aa5.12□□□□□ -1.59
HDAC4-211ENST00000494800 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
HDAC4-211ENST00000494800 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
HDAC4-211ENST00000494800 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
HDAC4-211ENST00000494800 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
HDAC4-211ENST00000494800 MT3P25713 68 aa4.93□□□□□ -1.62
HDAC4-211ENST00000494800 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
HDAC4-211ENST00000494800 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
HDAC4-211ENST00000494800 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
HDAC4-211ENST00000494800 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
HDAC4-211ENST00000494800 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
HDAC4-211ENST00000494800 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
HDAC4-211ENST00000494800 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
HDAC4-211ENST00000494800 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
HDAC4-211ENST00000494800 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
HDAC4-211ENST00000494800 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
HDAC4-211ENST00000494800 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
HDAC4-211ENST00000494800 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
HDAC4-211ENST00000494800 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
HDAC4-211ENST00000494800 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
HDAC4-211ENST00000494800 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
HDAC4-211ENST00000494800 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
HDAC4-211ENST00000494800 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
HDAC4-211ENST00000494800 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
HDAC4-211ENST00000494800 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
HDAC4-211ENST00000494800 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
HDAC4-211ENST00000494800 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
HDAC4-211ENST00000494800 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
HDAC4-211ENST00000494800 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
HDAC4-211ENST00000494800 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
HDAC4-211ENST00000494800 H3BS24 57 aa3.08□□□□□ -1.92
HDAC4-211ENST00000494800 PRM1P04553 51 aa2.96□□□□□ -1.94
HDAC4-211ENST00000494800 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
HDAC4-211ENST00000494800 INE1O15225 51 aa2.68□□□□□ -1.98
HDAC4-211ENST00000494800 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
HDAC4-211ENST00000494800 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
HDAC4-211ENST00000494800 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms