RNA–Protein interactions for RNA: ENST00000494278.1

FAM50A-207, Transcript of family with sequence similarity 50 member A, humanhuman

TSL 2

Gene FAM50A, Length 294 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-207ENST00000494278 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
FAM50A-207ENST00000494278 MT1MQ8N339 61 aa4.1□□□□□ -1.75
FAM50A-207ENST00000494278 PSPHP1O15172 72 aa4.08□□□□□ -1.76
FAM50A-207ENST00000494278 K7ERS5 55 aa4.04□□□□□ -1.76
FAM50A-207ENST00000494278 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
FAM50A-207ENST00000494278 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
FAM50A-207ENST00000494278 A6NED7 52 aa3.96□□□□□ -1.78
FAM50A-207ENST00000494278 RPS28P62857 69 aaKnown RBP3.96□□□□□ -1.78
FAM50A-207ENST00000494278 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
FAM50A-207ENST00000494278 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
FAM50A-207ENST00000494278 PCP4P48539 62 aa3.93□□□□□ -1.78
FAM50A-207ENST00000494278 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
FAM50A-207ENST00000494278 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
FAM50A-207ENST00000494278 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
FAM50A-207ENST00000494278 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
FAM50A-207ENST00000494278 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
FAM50A-207ENST00000494278 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
FAM50A-207ENST00000494278 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
FAM50A-207ENST00000494278 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
FAM50A-207ENST00000494278 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
FAM50A-207ENST00000494278 MT4P47944 62 aa3.83□□□□□ -1.8
FAM50A-207ENST00000494278 ROMO1P60602 79 aa3.79□□□□□ -1.8
FAM50A-207ENST00000494278 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
FAM50A-207ENST00000494278 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
FAM50A-207ENST00000494278 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
FAM50A-207ENST00000494278 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
FAM50A-207ENST00000494278 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
FAM50A-207ENST00000494278 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
FAM50A-207ENST00000494278 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
FAM50A-207ENST00000494278 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
FAM50A-207ENST00000494278 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
FAM50A-207ENST00000494278 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
FAM50A-207ENST00000494278 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
FAM50A-207ENST00000494278 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
FAM50A-207ENST00000494278 MT1AP04731 61 aa3.53□□□□□ -1.84
FAM50A-207ENST00000494278 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
FAM50A-207ENST00000494278 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
FAM50A-207ENST00000494278 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
FAM50A-207ENST00000494278 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
FAM50A-207ENST00000494278 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
FAM50A-207ENST00000494278 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
FAM50A-207ENST00000494278 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
FAM50A-207ENST00000494278 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
FAM50A-207ENST00000494278 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
FAM50A-207ENST00000494278 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
FAM50A-207ENST00000494278 MT3P25713 68 aa3.2□□□□□ -1.9
FAM50A-207ENST00000494278 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
FAM50A-207ENST00000494278 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
FAM50A-207ENST00000494278 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
FAM50A-207ENST00000494278 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
FAM50A-207ENST00000494278 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
FAM50A-207ENST00000494278 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
FAM50A-207ENST00000494278 MUC5ACP98088 5654 aa3□□□□□ -1.93
FAM50A-207ENST00000494278 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
FAM50A-207ENST00000494278 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
FAM50A-207ENST00000494278 KTN1-AS1Q86SY8 53 aa2.94□□□□□ -1.94
FAM50A-207ENST00000494278 SVIPQ8NHG7 77 aa2.77□□□□□ -1.97
FAM50A-207ENST00000494278 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
FAM50A-207ENST00000494278 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
FAM50A-207ENST00000494278 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
FAM50A-207ENST00000494278 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
FAM50A-207ENST00000494278 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
FAM50A-207ENST00000494278 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
FAM50A-207ENST00000494278 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
FAM50A-207ENST00000494278 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
FAM50A-207ENST00000494278 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
FAM50A-207ENST00000494278 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
FAM50A-207ENST00000494278 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
FAM50A-207ENST00000494278 NDUFAF8A1L188 74 aa2.13□□□□□ -2.07
FAM50A-207ENST00000494278 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
FAM50A-207ENST00000494278 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
FAM50A-207ENST00000494278 PRM1P04553 51 aa1.94□□□□□ -2.1
FAM50A-207ENST00000494278 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
FAM50A-207ENST00000494278 INE1O15225 51 aa1.74□□□□□ -2.13
FAM50A-207ENST00000494278 A0A0A0MQY5 61 aa1.68□□□□□ -2.14
FAM50A-207ENST00000494278 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
FAM50A-207ENST00000494278 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
FAM50A-207ENST00000494278 H3BS24 57 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 110.2 ms