RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
TRAPPC12-222ENST00000493792 UQCR11O14957 56 aa4□□□□□ -1.77
TRAPPC12-222ENST00000493792 V9GYY9 64 aa3.95□□□□□ -1.78
TRAPPC12-222ENST00000493792 PSPHP1O15172 72 aa3.94□□□□□ -1.78
TRAPPC12-222ENST00000493792 MIR22HGQ0VDD5 57 aa3.93□□□□□ -1.78
TRAPPC12-222ENST00000493792 TNP1P09430 55 aa3.91□□□□□ -1.78
TRAPPC12-222ENST00000493792 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
TRAPPC12-222ENST00000493792 PCP4P48539 62 aa3.9□□□□□ -1.79
TRAPPC12-222ENST00000493792 Q1T7F1 81 aa3.89□□□□□ -1.79
TRAPPC12-222ENST00000493792 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
TRAPPC12-222ENST00000493792 K7ERS5 55 aa3.87□□□□□ -1.79
TRAPPC12-222ENST00000493792 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
TRAPPC12-222ENST00000493792 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
TRAPPC12-222ENST00000493792 MT1EP04732 61 aa3.85□□□□□ -1.79
TRAPPC12-222ENST00000493792 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
TRAPPC12-222ENST00000493792 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
TRAPPC12-222ENST00000493792 A6NED7 52 aa3.82□□□□□ -1.8
TRAPPC12-222ENST00000493792 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
TRAPPC12-222ENST00000493792 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
TRAPPC12-222ENST00000493792 RPS28P62857 69 aaKnown RBP3.79□□□□□ -1.8
TRAPPC12-222ENST00000493792 MT4P47944 62 aa3.73□□□□□ -1.81
TRAPPC12-222ENST00000493792 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
TRAPPC12-222ENST00000493792 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
TRAPPC12-222ENST00000493792 MT1GP13640 62 aa3.72□□□□□ -1.81
TRAPPC12-222ENST00000493792 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
TRAPPC12-222ENST00000493792 MT1LQ93083 61 aa3.7□□□□□ -1.82
TRAPPC12-222ENST00000493792 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
TRAPPC12-222ENST00000493792 MT1MQ8N339 61 aa3.66□□□□□ -1.82
TRAPPC12-222ENST00000493792 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
TRAPPC12-222ENST00000493792 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
TRAPPC12-222ENST00000493792 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
TRAPPC12-222ENST00000493792 ROMO1P60602 79 aa3.59□□□□□ -1.83
TRAPPC12-222ENST00000493792 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
TRAPPC12-222ENST00000493792 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
TRAPPC12-222ENST00000493792 H3BS24 57 aa3.48□□□□□ -1.85
TRAPPC12-222ENST00000493792 KRTAP15-1Q3LI76 137 aa3.48□□□□□ -1.85
TRAPPC12-222ENST00000493792 BRK1Q8WUW1 75 aa3.42□□□□□ -1.86
TRAPPC12-222ENST00000493792 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
TRAPPC12-222ENST00000493792 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
TRAPPC12-222ENST00000493792 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC12-222ENST00000493792 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
TRAPPC12-222ENST00000493792 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
TRAPPC12-222ENST00000493792 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
TRAPPC12-222ENST00000493792 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC12-222ENST00000493792 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
TRAPPC12-222ENST00000493792 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
TRAPPC12-222ENST00000493792 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
TRAPPC12-222ENST00000493792 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
TRAPPC12-222ENST00000493792 MT1AP04731 61 aa3.15□□□□□ -1.91
TRAPPC12-222ENST00000493792 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
TRAPPC12-222ENST00000493792 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC12-222ENST00000493792 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
TRAPPC12-222ENST00000493792 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
TRAPPC12-222ENST00000493792 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
TRAPPC12-222ENST00000493792 PRO0628Q9UI54 55 aa3.03□□□□□ -1.92
TRAPPC12-222ENST00000493792 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
TRAPPC12-222ENST00000493792 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
TRAPPC12-222ENST00000493792 MT3P25713 68 aa2.9□□□□□ -1.95
TRAPPC12-222ENST00000493792 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
TRAPPC12-222ENST00000493792 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
TRAPPC12-222ENST00000493792 SVIPQ8NHG7 77 aa2.84□□□□□ -1.95
TRAPPC12-222ENST00000493792 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
TRAPPC12-222ENST00000493792 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
TRAPPC12-222ENST00000493792 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
TRAPPC12-222ENST00000493792 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
TRAPPC12-222ENST00000493792 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
TRAPPC12-222ENST00000493792 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
TRAPPC12-222ENST00000493792 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
TRAPPC12-222ENST00000493792 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
TRAPPC12-222ENST00000493792 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
TRAPPC12-222ENST00000493792 NDUFAF8A1L188 74 aa2.18□□□□□ -2.06
TRAPPC12-222ENST00000493792 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
TRAPPC12-222ENST00000493792 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
TRAPPC12-222ENST00000493792 PRM1P04553 51 aa1.85□□□□□ -2.11
TRAPPC12-222ENST00000493792 A0A0A0MQY5 61 aa1.79□□□□□ -2.12
TRAPPC12-222ENST00000493792 INE1O15225 51 aa1.73□□□□□ -2.13
TRAPPC12-222ENST00000493792 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
TRAPPC12-222ENST00000493792 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms