RNA–Protein interactions for RNA: ENST00000493156.6

RFC2-210, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-210ENST00000493156 KRTAP5-4Q6L8H1 288 aa6.8□□□□□ -1.32
RFC2-210ENST00000493156 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
RFC2-210ENST00000493156 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
RFC2-210ENST00000493156 CCDC179H3BU77 68 aa6.71□□□□□ -1.34
RFC2-210ENST00000493156 LINC01558Q9Y6Z2 57 aa6.68□□□□□ -1.34
RFC2-210ENST00000493156 KRTAP12-3P60328 96 aa6.65□□□□□ -1.34
RFC2-210ENST00000493156 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
RFC2-210ENST00000493156 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
RFC2-210ENST00000493156 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
RFC2-210ENST00000493156 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
RFC2-210ENST00000493156 UQCR11O14957 56 aa6.53□□□□□ -1.36
RFC2-210ENST00000493156 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
RFC2-210ENST00000493156 TMEM258P61165 79 aa6.46□□□□□ -1.38
RFC2-210ENST00000493156 KRTAP25-1Q3LHN0 102 aa6.44□□□□□ -1.38
RFC2-210ENST00000493156 KRTAP20-2Q3LI61 65 aa6.4□□□□□ -1.38
RFC2-210ENST00000493156 KRTAP5-3Q6L8H2 238 aa6.37□□□□□ -1.39
RFC2-210ENST00000493156 SPRR5A0A1B0GTR4 108 aa6.36□□□□□ -1.39
RFC2-210ENST00000493156 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
RFC2-210ENST00000493156 KRTAP5-7Q6L8G8 165 aa6.33□□□□□ -1.4
RFC2-210ENST00000493156 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
RFC2-210ENST00000493156 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
RFC2-210ENST00000493156 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
RFC2-210ENST00000493156 K7ERS5 55 aa6.26□□□□□ -1.41
RFC2-210ENST00000493156 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
RFC2-210ENST00000493156 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
RFC2-210ENST00000493156 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
RFC2-210ENST00000493156 V9GYY9 64 aa6.15□□□□□ -1.42
RFC2-210ENST00000493156 PSPHP1O15172 72 aa6.13□□□□□ -1.43
RFC2-210ENST00000493156 Q1T7F1 81 aa6.1□□□□□ -1.43
RFC2-210ENST00000493156 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
RFC2-210ENST00000493156 MT1AP04731 61 aa5.95□□□□□ -1.46
RFC2-210ENST00000493156 KRTAP5-2Q701N4 177 aa5.94□□□□□ -1.46
RFC2-210ENST00000493156 CDC42SE1Q9NRR8 79 aa5.92□□□□□ -1.46
RFC2-210ENST00000493156 A6NED7 52 aa5.91□□□□□ -1.46
RFC2-210ENST00000493156 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
RFC2-210ENST00000493156 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
RFC2-210ENST00000493156 ROMO1P60602 79 aa5.82□□□□□ -1.48
RFC2-210ENST00000493156 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
RFC2-210ENST00000493156 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
RFC2-210ENST00000493156 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
RFC2-210ENST00000493156 KRTAP5-8O75690 187 aa5.69□□□□□ -1.5
RFC2-210ENST00000493156 KRTAP6-2Q3LI66 62 aa5.67□□□□□ -1.5
RFC2-210ENST00000493156 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
RFC2-210ENST00000493156 MUC5ACP98088 5654 aa5.47□□□□□ -1.53
RFC2-210ENST00000493156 AHNAKQ09666 5890 aaKnown RBP5.46□□□□□ -1.53
RFC2-210ENST00000493156 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
RFC2-210ENST00000493156 MT3P25713 68 aa5.43□□□□□ -1.54
RFC2-210ENST00000493156 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
RFC2-210ENST00000493156 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
RFC2-210ENST00000493156 PCP4P48539 62 aa5.26□□□□□ -1.57
RFC2-210ENST00000493156 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
RFC2-210ENST00000493156 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
RFC2-210ENST00000493156 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
RFC2-210ENST00000493156 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
RFC2-210ENST00000493156 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
RFC2-210ENST00000493156 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
RFC2-210ENST00000493156 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
RFC2-210ENST00000493156 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
RFC2-210ENST00000493156 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
RFC2-210ENST00000493156 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
RFC2-210ENST00000493156 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
RFC2-210ENST00000493156 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
RFC2-210ENST00000493156 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
RFC2-210ENST00000493156 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
RFC2-210ENST00000493156 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
RFC2-210ENST00000493156 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
RFC2-210ENST00000493156 KTN1-AS1Q86SY8 53 aa3.9□□□□□ -1.79
RFC2-210ENST00000493156 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
RFC2-210ENST00000493156 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
RFC2-210ENST00000493156 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
RFC2-210ENST00000493156 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
RFC2-210ENST00000493156 H3BS24 57 aa3.26□□□□□ -1.89
RFC2-210ENST00000493156 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
RFC2-210ENST00000493156 PRM1P04553 51 aa2.96□□□□□ -1.94
RFC2-210ENST00000493156 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
RFC2-210ENST00000493156 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
RFC2-210ENST00000493156 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
RFC2-210ENST00000493156 INE1O15225 51 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 282.7 ms