RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 TMEM258P61165 79 aa6.25□□□□□ -1.41
PTPRU-207ENST00000492954 GPR98Q8WXG9 6306 aa6.25□□□□□ -1.41
PTPRU-207ENST00000492954 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
PTPRU-207ENST00000492954 UQCR11O14957 56 aa6.22□□□□□ -1.41
PTPRU-207ENST00000492954 MT4P47944 62 aa6.21□□□□□ -1.42
PTPRU-207ENST00000492954 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
PTPRU-207ENST00000492954 HMCN1Q96RW7 5635 aa6.15□□□□□ -1.43
PTPRU-207ENST00000492954 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
PTPRU-207ENST00000492954 KRTAP5-4Q6L8H1 288 aa6.12□□□□□ -1.43
PTPRU-207ENST00000492954 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
PTPRU-207ENST00000492954 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
PTPRU-207ENST00000492954 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
PTPRU-207ENST00000492954 K7ERS5 55 aa5.96□□□□□ -1.46
PTPRU-207ENST00000492954 PSPHP1O15172 72 aa5.95□□□□□ -1.46
PTPRU-207ENST00000492954 PCP4P48539 62 aa5.91□□□□□ -1.46
PTPRU-207ENST00000492954 V9GYY9 64 aa5.91□□□□□ -1.46
PTPRU-207ENST00000492954 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.46
PTPRU-207ENST00000492954 Q1T7F1 81 aa5.88□□□□□ -1.47
PTPRU-207ENST00000492954 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
PTPRU-207ENST00000492954 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
PTPRU-207ENST00000492954 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
PTPRU-207ENST00000492954 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
PTPRU-207ENST00000492954 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
PTPRU-207ENST00000492954 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
PTPRU-207ENST00000492954 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
PTPRU-207ENST00000492954 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
PTPRU-207ENST00000492954 A6NED7 52 aa5.73□□□□□ -1.49
PTPRU-207ENST00000492954 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
PTPRU-207ENST00000492954 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
PTPRU-207ENST00000492954 LCE3CQ5T5A8 94 aa5.67□□□□□ -1.5
PTPRU-207ENST00000492954 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
PTPRU-207ENST00000492954 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
PTPRU-207ENST00000492954 KRTAP5-7Q6L8G8 165 aa5.61□□□□□ -1.51
PTPRU-207ENST00000492954 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
PTPRU-207ENST00000492954 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
PTPRU-207ENST00000492954 ROMO1P60602 79 aa5.56□□□□□ -1.52
PTPRU-207ENST00000492954 MT1AP04731 61 aa5.45□□□□□ -1.54
PTPRU-207ENST00000492954 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
PTPRU-207ENST00000492954 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
PTPRU-207ENST00000492954 KRTAP5-2Q701N4 177 aa5.36□□□□□ -1.55
PTPRU-207ENST00000492954 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
PTPRU-207ENST00000492954 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
PTPRU-207ENST00000492954 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
PTPRU-207ENST00000492954 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
PTPRU-207ENST00000492954 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
PTPRU-207ENST00000492954 MT3P25713 68 aa4.98□□□□□ -1.61
PTPRU-207ENST00000492954 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
PTPRU-207ENST00000492954 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
PTPRU-207ENST00000492954 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
PTPRU-207ENST00000492954 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
PTPRU-207ENST00000492954 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
PTPRU-207ENST00000492954 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
PTPRU-207ENST00000492954 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
PTPRU-207ENST00000492954 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
PTPRU-207ENST00000492954 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
PTPRU-207ENST00000492954 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
PTPRU-207ENST00000492954 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
PTPRU-207ENST00000492954 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
PTPRU-207ENST00000492954 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
PTPRU-207ENST00000492954 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
PTPRU-207ENST00000492954 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
PTPRU-207ENST00000492954 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
PTPRU-207ENST00000492954 H3BS24 57 aa3.91□□□□□ -1.78
PTPRU-207ENST00000492954 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
PTPRU-207ENST00000492954 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
PTPRU-207ENST00000492954 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
PTPRU-207ENST00000492954 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
PTPRU-207ENST00000492954 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
PTPRU-207ENST00000492954 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
PTPRU-207ENST00000492954 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
PTPRU-207ENST00000492954 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
PTPRU-207ENST00000492954 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
PTPRU-207ENST00000492954 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
PTPRU-207ENST00000492954 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
PTPRU-207ENST00000492954 INE1O15225 51 aa2.89□□□□□ -1.95
PTPRU-207ENST00000492954 PRM1P04553 51 aa2.86□□□□□ -1.95
PTPRU-207ENST00000492954 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
PTPRU-207ENST00000492954 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 167.7 ms