RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MUC3AQ02505 3323 aa-1.38□□□□□ -2.63
CLK1-213ENST00000492793 SMIM31A0A1B0GVY4 71 aa-1.4□□□□□ -2.63
CLK1-213ENST00000492793 FRYLO94915 3013 aa-1.4□□□□□ -2.63
CLK1-213ENST00000492793 MKI67P46013 3256 aaKnown RBP-1.41□□□□□ -2.63
CLK1-213ENST00000492793 RPS29P62273 56 aaKnown RBP-1.41□□□□□ -2.64
CLK1-213ENST00000492793 SZT2Q5T011 3432 aa-1.41□□□□□ -2.64
CLK1-213ENST00000492793 LEAP2Q969E1 77 aa-1.42□□□□□ -2.64
CLK1-213ENST00000492793 USP34Q70CQ2 3546 aa-1.43□□□□□ -2.64
CLK1-213ENST00000492793 DNAH14Q0VDD8 3507 aa-1.43□□□□□ -2.64
CLK1-213ENST00000492793 DEFB4AO15263 64 aa-1.43□□□□□ -2.64
CLK1-213ENST00000492793 SMIM2Q9BVW6 85 aa-1.43□□□□□ -2.64
CLK1-213ENST00000492793 UNC80Q8N2C7 3258 aa-1.46□□□□□ -2.64
CLK1-213ENST00000492793 ABCA5Q8WWZ7 1642 aa-1.47□□□□□ -2.64
CLK1-213ENST00000492793 CFAP47Q6ZTR5 3102 aa-1.48□□□□□ -2.65
CLK1-213ENST00000492793 ADCY10Q96PN6 1610 aa-1.49□□□□□ -2.65
CLK1-213ENST00000492793 DEFB136Q30KP8 78 aa-1.5□□□□□ -2.65
CLK1-213ENST00000492793 CMC2Q9NRP2 79 aa-1.5□□□□□ -2.65
CLK1-213ENST00000492793 MROH2AA6NES4 1674 aa-1.51□□□□□ -2.65
CLK1-213ENST00000492793 DNAH12Q6ZR08 3092 aa-1.51□□□□□ -2.65
CLK1-213ENST00000492793 PCNTO95613 3336 aa-1.52□□□□□ -2.65
CLK1-213ENST00000492793 DDX60Q8IY21 1712 aaKnown RBP-1.52□□□□□ -2.65
CLK1-213ENST00000492793 ABCC8Q09428 1581 aa-1.53□□□□□ -2.65
CLK1-213ENST00000492793 NRXN3Q9Y4C0 1643 aa-1.53□□□□□ -2.65
CLK1-213ENST00000492793 IQGAP1P46940 1657 aa-1.54□□□□□ -2.66
CLK1-213ENST00000492793 TRPM2O94759 1503 aa-1.56□□□□□ -2.66
CLK1-213ENST00000492793 NFAT5O94916 1531 aa-1.56□□□□□ -2.66
CLK1-213ENST00000492793 CEP250Q9BV73 2442 aa-1.56□□□□□ -2.66
CLK1-213ENST00000492793 FANCD2Q9BXW9 1451 aa-1.57□□□□□ -2.66
CLK1-213ENST00000492793 CLTCL1P53675 1640 aa-1.6□□□□□ -2.67
CLK1-213ENST00000492793 NDUFA1O15239 70 aa-1.61□□□□□ -2.67
CLK1-213ENST00000492793 KRTAP19-2Q3LHN2 52 aa-1.61□□□□□ -2.67
CLK1-213ENST00000492793 ERICH3Q5RHP9 1530 aa-1.61□□□□□ -2.67
CLK1-213ENST00000492793 ASPMQ8IZT6 3477 aa-1.62□□□□□ -2.67
CLK1-213ENST00000492793 CENPFP49454 3210 aa-1.62□□□□□ -2.67
CLK1-213ENST00000492793 BRCA2P51587 3418 aa-1.65□□□□□ -2.67
CLK1-213ENST00000492793 CDH23Q9H251 3354 aa-1.66□□□□□ -2.68
CLK1-213ENST00000492793 VPS13AQ96RL7 3174 aa-1.7□□□□□ -2.68
CLK1-213ENST00000492793 TTTY10Q9BZA0 68 aa-1.71□□□□□ -2.68
CLK1-213ENST00000492793 SNRPGP15A8MWD9 76 aa-1.75□□□□□ -2.69
CLK1-213ENST00000492793 UTRNP46939 3433 aa-1.75□□□□□ -2.69
CLK1-213ENST00000492793 TOMM7Q9P0U1 55 aa-1.79□□□□□ -2.7
CLK1-213ENST00000492793 XIRP2A4UGR9 3374 aa-1.84□□□□□ -2.7
CLK1-213ENST00000492793 GOLGB1Q14789 3259 aaKnown RBP-1.85□□□□□ -2.7
CLK1-213ENST00000492793 LINC01590Q5TEZ4 76 aa-1.86□□□□□ -2.71
CLK1-213ENST00000492793 DEFB104AQ8WTQ1 72 aa-1.86□□□□□ -2.71
CLK1-213ENST00000492793 RPL39P62891 51 aaKnown RBP-1.92□□□□□ -2.72
CLK1-213ENST00000492793 RHPN1-AS1Q9BWJ2 59 aa-1.92□□□□□ -2.72
CLK1-213ENST00000492793 SAMD9LQ8IVG5 1584 aa-1.93□□□□□ -2.72
CLK1-213ENST00000492793 DUOX1Q9NRD9 1551 aa-1.96□□□□□ -2.72
CLK1-213ENST00000492793 TOMM5Q8N4H5 51 aa-1.96□□□□□ -2.72
CLK1-213ENST00000492793 IQGAP2Q13576 1575 aa-1.97□□□□□ -2.72
CLK1-213ENST00000492793 CD52P31358 61 aa-1.99□□□□□ -2.73
CLK1-213ENST00000492793 DEFB133Q30KQ1 61 aa-2□□□□□ -2.73
CLK1-213ENST00000492793 A0A096LNI7 61 aa-2.01□□□□□ -2.73
CLK1-213ENST00000492793 RPL39LQ96EH5 51 aaKnown RBP-2.02□□□□□ -2.73
CLK1-213ENST00000492793 ATP7AQ04656 1500 aa-2.03□□□□□ -2.73
CLK1-213ENST00000492793 HTN1P15515 57 aa-2.07□□□□□ -2.74
CLK1-213ENST00000492793 TOP2AP11388 1531 aaKnown RBP-2.12□□□□□ -2.75
CLK1-213ENST00000492793 DEFB124Q8NES8 71 aa-2.16□□□□□ -2.76
CLK1-213ENST00000492793 MROH2BQ7Z745 1585 aa-2.17□□□□□ -2.76
CLK1-213ENST00000492793 LINC01556Q5JQF7 62 aa-2.23□□□□□ -2.77
CLK1-213ENST00000492793 H3BUX3 64 aa-2.37□□□□□ -2.79
CLK1-213ENST00000492793 K7EIM0 57 aa-2.42□□□□□ -2.8
CLK1-213ENST00000492793 APELAP0DMC3 54 aa-2.48□□□□□ -2.81
CLK1-213ENST00000492793 A0A096LPF7 62 aa-2.49□□□□□ -2.81
CLK1-213ENST00000492793 HTN3P15516 51 aa-2.49□□□□□ -2.81
CLK1-213ENST00000492793 SNRPGP62308 76 aaKnown RBP-2.49□□□□□ -2.81
CLK1-213ENST00000492793 ARHGAP5-AS1Q96IT6 56 aa-2.51□□□□□ -2.81
CLK1-213ENST00000492793 H3BSH0 61 aa-2.55□□□□□ -2.82
CLK1-213ENST00000492793 PRCDQ00LT1 54 aa-2.57□□□□□ -2.82
CLK1-213ENST00000492793 GCC2Q8IWJ2 1684 aa-2.57□□□□□ -2.82
CLK1-213ENST00000492793 Q9Y3F1 56 aa-2.65□□□□□ -2.83
CLK1-213ENST00000492793 COX14Q96I36 57 aa-2.71□□□□□ -2.84
CLK1-213ENST00000492793 TMEM167AQ8TBQ9 72 aa-2.73□□□□□ -2.85
CLK1-213ENST00000492793 STATHP02808 62 aa-2.74□□□□□ -2.85
CLK1-213ENST00000492793 DEFB108BQ8NET1 73 aa-2.78□□□□□ -2.85
CLK1-213ENST00000492793 RPL39P5Q59GN2 51 aa-2.85□□□□□ -2.87
CLK1-213ENST00000492793 DEFB108AA8MXU0 73 aa-2.87□□□□□ -2.87
Retrieved 78 of 20,778 RNA–protein pairs in 99.8 ms