RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 LCE4AQ5TA78 99 aa8.22□□□□□ -1.09
CTDSP1-211ENST00000492545 GPR98Q8WXG9 6306 aa8.18□□□□□ -1.1
CTDSP1-211ENST00000492545 KRTAP12-3P60328 96 aa8.16□□□□□ -1.1
CTDSP1-211ENST00000492545 LCE1DQ5T752 114 aa8.16□□□□□ -1.1
CTDSP1-211ENST00000492545 MIR22HGQ0VDD5 57 aa8.13□□□□□ -1.11
CTDSP1-211ENST00000492545 KRTAP4-3Q9BYR4 195 aa8.11□□□□□ -1.11
CTDSP1-211ENST00000492545 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
CTDSP1-211ENST00000492545 K7ERS5 55 aa8.06□□□□□ -1.12
CTDSP1-211ENST00000492545 PCP4P48539 62 aa8.06□□□□□ -1.12
CTDSP1-211ENST00000492545 MT4P47944 62 aa8.05□□□□□ -1.12
CTDSP1-211ENST00000492545 HMCN1Q96RW7 5635 aa8.05□□□□□ -1.12
CTDSP1-211ENST00000492545 KRTAP5-4Q6L8H1 288 aa8.04□□□□□ -1.12
CTDSP1-211ENST00000492545 V9GYY9 64 aa8.04□□□□□ -1.12
CTDSP1-211ENST00000492545 Q1T7F1 81 aa7.93□□□□□ -1.14
CTDSP1-211ENST00000492545 KRTAP4-7Q9BYR0 210 aa7.93□□□□□ -1.14
CTDSP1-211ENST00000492545 PSPHP1O15172 72 aa7.9□□□□□ -1.14
CTDSP1-211ENST00000492545 KRTAP19-4Q3LI73 84 aa7.85□□□□□ -1.15
CTDSP1-211ENST00000492545 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
CTDSP1-211ENST00000492545 KRTAP4-6Q9BYQ5 205 aa7.82□□□□□ -1.16
CTDSP1-211ENST00000492545 RPS28P62857 69 aaKnown RBP7.76□□□□□ -1.17
CTDSP1-211ENST00000492545 KRTAP5-5Q701N2 237 aaPredicted RBP7.71□□□□□ -1.18
CTDSP1-211ENST00000492545 AHNAK2Q8IVF2 5795 aa7.7□□□□□ -1.18
CTDSP1-211ENST00000492545 A6NED7 52 aa7.67□□□□□ -1.18
CTDSP1-211ENST00000492545 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
CTDSP1-211ENST00000492545 KRTAP5-10Q6L8G5 202 aa7.61□□□□□ -1.19
CTDSP1-211ENST00000492545 SPRR5A0A1B0GTR4 108 aa7.59□□□□□ -1.19
CTDSP1-211ENST00000492545 KRTAP12-4P60329 112 aa7.58□□□□□ -1.2
CTDSP1-211ENST00000492545 CDC42SE1Q9NRR8 79 aa7.58□□□□□ -1.2
CTDSP1-211ENST00000492545 KRTAP20-2Q3LI61 65 aa7.57□□□□□ -1.2
CTDSP1-211ENST00000492545 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
CTDSP1-211ENST00000492545 LCE3CQ5T5A8 94 aa7.51□□□□□ -1.21
CTDSP1-211ENST00000492545 ROMO1P60602 79 aa7.44□□□□□ -1.22
CTDSP1-211ENST00000492545 KRTAP5-3Q6L8H2 238 aa7.44□□□□□ -1.22
CTDSP1-211ENST00000492545 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
CTDSP1-211ENST00000492545 KRTAP5-7Q6L8G8 165 aa7.35□□□□□ -1.23
CTDSP1-211ENST00000492545 SYNE1Q8NF91 8797 aaKnown RBP7.33□□□□□ -1.24
CTDSP1-211ENST00000492545 MT1AP04731 61 aa7.18□□□□□ -1.26
CTDSP1-211ENST00000492545 KRTAP6-1Q3LI64 71 aa7.1□□□□□ -1.27
CTDSP1-211ENST00000492545 KRTAP5-2Q701N4 177 aa7.04□□□□□ -1.28
CTDSP1-211ENST00000492545 KRTAP9-6A8MVA2 160 aa7.01□□□□□ -1.29
CTDSP1-211ENST00000492545 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
CTDSP1-211ENST00000492545 KRTAP4-11Q9BYQ6 195 aa6.94□□□□□ -1.3
CTDSP1-211ENST00000492545 BRK1Q8WUW1 75 aa6.85□□□□□ -1.31
CTDSP1-211ENST00000492545 KRTAP6-2Q3LI66 62 aa6.8□□□□□ -1.32
CTDSP1-211ENST00000492545 KRTAP5-8O75690 187 aa6.68□□□□□ -1.34
CTDSP1-211ENST00000492545 MT3P25713 68 aa6.61□□□□□ -1.35
CTDSP1-211ENST00000492545 OBSCNQ5VST9 7968 aa6.53□□□□□ -1.36
CTDSP1-211ENST00000492545 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
CTDSP1-211ENST00000492545 KRTAP9-9Q9BYP9 154 aa6.39□□□□□ -1.39
CTDSP1-211ENST00000492545 MUC5BQ9HC84 5762 aaPredicted RBP6.38□□□□□ -1.39
CTDSP1-211ENST00000492545 PRO0628Q9UI54 55 aa6.38□□□□□ -1.39
CTDSP1-211ENST00000492545 AHNAKQ09666 5890 aaKnown RBP6.35□□□□□ -1.39
CTDSP1-211ENST00000492545 MUC5ACP98088 5654 aa6.34□□□□□ -1.39
CTDSP1-211ENST00000492545 KRTAP5-1Q6L8H4 278 aa6.3□□□□□ -1.4
CTDSP1-211ENST00000492545 LCE1EQ5T753 118 aa6.1□□□□□ -1.43
CTDSP1-211ENST00000492545 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
CTDSP1-211ENST00000492545 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
CTDSP1-211ENST00000492545 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
CTDSP1-211ENST00000492545 H3BS24 57 aa5.7□□□□□ -1.5
CTDSP1-211ENST00000492545 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
CTDSP1-211ENST00000492545 LCE1BQ5T7P3 118 aa5.66□□□□□ -1.5
CTDSP1-211ENST00000492545 LCE1CQ5T751 118 aa5.65□□□□□ -1.5
CTDSP1-211ENST00000492545 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
CTDSP1-211ENST00000492545 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
CTDSP1-211ENST00000492545 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.14□□□□□ -1.59
CTDSP1-211ENST00000492545 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
CTDSP1-211ENST00000492545 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
CTDSP1-211ENST00000492545 KRTAP5-11Q6L8G4 156 aa5.1□□□□□ -1.59
CTDSP1-211ENST00000492545 LCE1FQ5T754 118 aa5.02□□□□□ -1.61
CTDSP1-211ENST00000492545 KRTAP21-2Q3LI59 83 aa4.69□□□□□ -1.66
CTDSP1-211ENST00000492545 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
CTDSP1-211ENST00000492545 PHGR1C9JFL3 82 aa4.43□□□□□ -1.7
CTDSP1-211ENST00000492545 KRTAP4-4Q9BYR3 166 aa4.23□□□□□ -1.73
CTDSP1-211ENST00000492545 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
CTDSP1-211ENST00000492545 PRM1P04553 51 aa3.76□□□□□ -1.81
CTDSP1-211ENST00000492545 INE1O15225 51 aa3.73□□□□□ -1.81
CTDSP1-211ENST00000492545 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
CTDSP1-211ENST00000492545 MUC16Q8WXI7 14507 aa2.84□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 77 ms