RNA–Protein interactions for RNA: ENST00000491658.1

TFRC-215, Transcript of transferrin receptor, humanhuman

TSL 5

Gene TFRC, Length 396 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-215ENST00000491658 SACSQ9NZJ4 4579 aa0.37□□□□□ -2.35
TFRC-215ENST00000491658 UBR4Q5T4S7 5183 aa0.37□□□□□ -2.35
TFRC-215ENST00000491658 MYCBP2O75592 4640 aa0.36□□□□□ -2.35
TFRC-215ENST00000491658 KMT2DO14686 5537 aa0.36□□□□□ -2.35
TFRC-215ENST00000491658 LRP1BQ9NZR2 4599 aa0.36□□□□□ -2.35
TFRC-215ENST00000491658 FRAS1Q86XX4 4008 aa0.36□□□□□ -2.35
TFRC-215ENST00000491658 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
TFRC-215ENST00000491658 MT1HP80294 61 aa0.36□□□□□ -2.35
TFRC-215ENST00000491658 LRP1Q07954 4544 aaKnown RBP0.36□□□□□ -2.35
TFRC-215ENST00000491658 DNAH11Q96DT5 4516 aa0.35□□□□□ -2.35
TFRC-215ENST00000491658 VPS13BQ7Z7G8 4022 aa0.35□□□□□ -2.35
TFRC-215ENST00000491658 PKD1P98161 4303 aa0.35□□□□□ -2.35
TFRC-215ENST00000491658 M0QZ58 72 aa0.35□□□□□ -2.35
TFRC-215ENST00000491658 SRRM2Q9UQ35 2752 aaKnown RBP0.35□□□□□ -2.35
TFRC-215ENST00000491658 FAT2Q9NYQ8 4349 aa0.35□□□□□ -2.35
TFRC-215ENST00000491658 DNAH17Q9UFH2 4485 aa0.35□□□□□ -2.35
TFRC-215ENST00000491658 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
TFRC-215ENST00000491658 VPS13DQ5THJ4 4388 aa0.35□□□□□ -2.35
TFRC-215ENST00000491658 HMCN2Q8NDA2 5059 aa0.35□□□□□ -2.35
TFRC-215ENST00000491658 LRP2P98164 4655 aa0.35□□□□□ -2.35
TFRC-215ENST00000491658 LPAP08519 4548 aa0.34□□□□□ -2.35
TFRC-215ENST00000491658 DNAH2Q9P225 4427 aa0.34□□□□□ -2.35
TFRC-215ENST00000491658 FAT3Q8TDW7 4589 aa0.34□□□□□ -2.35
TFRC-215ENST00000491658 H0YAA0 97 aa0.34□□□□□ -2.36
TFRC-215ENST00000491658 MT2AP02795 61 aa0.34□□□□□ -2.36
TFRC-215ENST00000491658 MT1FP04733 61 aa0.34□□□□□ -2.36
TFRC-215ENST00000491658 DNAH8Q96JB1 4490 aa0.34□□□□□ -2.36
TFRC-215ENST00000491658 FAT1Q14517 4588 aa0.34□□□□□ -2.36
TFRC-215ENST00000491658 DYNC2H1Q8NCM8 4307 aaKnown RBP0.34□□□□□ -2.36
TFRC-215ENST00000491658 DNAH1Q9P2D7 4330 aa0.34□□□□□ -2.36
TFRC-215ENST00000491658 DNAH6Q9C0G6 4158 aa0.34□□□□□ -2.36
TFRC-215ENST00000491658 KRTAP19-2Q3LHN2 52 aa0.33□□□□□ -2.36
TFRC-215ENST00000491658 HSPG2P98160 4391 aa0.33□□□□□ -2.36
TFRC-215ENST00000491658 PKHD1P08F94 4074 aa0.33□□□□□ -2.36
TFRC-215ENST00000491658 MUC2Q02817 5179 aa0.33□□□□□ -2.36
TFRC-215ENST00000491658 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
TFRC-215ENST00000491658 KRTAP8-1Q8IUC2 63 aa0.32□□□□□ -2.36
TFRC-215ENST00000491658 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
TFRC-215ENST00000491658 SPRR2EP22531 72 aa0.31□□□□□ -2.36
TFRC-215ENST00000491658 SPRR2BP35325 72 aa0.31□□□□□ -2.36
TFRC-215ENST00000491658 SPRR2AP35326 72 aa0.31□□□□□ -2.36
TFRC-215ENST00000491658 SPRR2FQ96RM1 72 aa0.31□□□□□ -2.36
TFRC-215ENST00000491658 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
TFRC-215ENST00000491658 MT1BP07438 61 aa0.3□□□□□ -2.36
TFRC-215ENST00000491658 TNP1P09430 55 aa0.3□□□□□ -2.36
TFRC-215ENST00000491658 KRTAP19-6Q3LI70 58 aa0.3□□□□□ -2.36
TFRC-215ENST00000491658 SPRR2GQ9BYE4 73 aa0.3□□□□□ -2.36
TFRC-215ENST00000491658 USH2AO75445 5202 aa0.3□□□□□ -2.36
TFRC-215ENST00000491658 TNXBP22105 4242 aa0.3□□□□□ -2.36
TFRC-215ENST00000491658 MUC17Q685J3 4493 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 PKHD1L1Q86WI1 4243 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 KRTAP2-3P0C7H8 128 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 SPRR2DP22532 72 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 MT1XP80297 61 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 KRTAP19-8Q3LI54 63 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 KRTAP20-1Q3LI63 56 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 KRTAP2-4Q9BYR9 128 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 KRTAP2-1Q9BYU5 128 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 SSPOA2VEC9 5147 aa0.29□□□□□ -2.36
TFRC-215ENST00000491658 KRTAP19-5Q3LI72 72 aa0.28□□□□□ -2.36
TFRC-215ENST00000491658 MT1EP04732 61 aa0.26□□□□□ -2.37
TFRC-215ENST00000491658 MT4P47944 62 aa0.26□□□□□ -2.37
TFRC-215ENST00000491658 FLGP20930 4061 aaPredicted RBP0.26□□□□□ -2.37
TFRC-215ENST00000491658 MT1GP13640 62 aa0.25□□□□□ -2.37
TFRC-215ENST00000491658 KRTAP19-7Q3SYF9 63 aa0.25□□□□□ -2.37
TFRC-215ENST00000491658 MT1MQ8N339 61 aa0.25□□□□□ -2.37
TFRC-215ENST00000491658 MT1LQ93083 61 aa0.25□□□□□ -2.37
TFRC-215ENST00000491658 MUC12Q9UKN1 5478 aa0.25□□□□□ -2.37
TFRC-215ENST00000491658 SYNE2Q8WXH0 6885 aaKnown RBP0.25□□□□□ -2.37
TFRC-215ENST00000491658 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
TFRC-215ENST00000491658 PRM1P04553 51 aa0.22□□□□□ -2.37
TFRC-215ENST00000491658 MT1AP04731 61 aa0.21□□□□□ -2.38
TFRC-215ENST00000491658 KRTAP20-2Q3LI61 65 aa0.21□□□□□ -2.38
TFRC-215ENST00000491658 KRTAP6-1Q3LI64 71 aa0.21□□□□□ -2.38
TFRC-215ENST00000491658 KRTAP6-2Q3LI66 62 aa0.21□□□□□ -2.38
TFRC-215ENST00000491658 MACF1Q9UPN3 7388 aaKnown RBP0.21□□□□□ -2.38
TFRC-215ENST00000491658 DSTQ03001 7570 aaKnown RBP0.19□□□□□ -2.38
TFRC-215ENST00000491658 NEBP20929 6669 aa0.18□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms