RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
NCK1-211ENST00000491539 CCDC179H3BU77 68 aa4.99□□□□□ -1.61
NCK1-211ENST00000491539 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
NCK1-211ENST00000491539 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
NCK1-211ENST00000491539 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
NCK1-211ENST00000491539 MT1MQ8N339 61 aa4.96□□□□□ -1.62
NCK1-211ENST00000491539 ATP5EP56381 51 aaPredicted RBP4.95□□□□□ -1.62
NCK1-211ENST00000491539 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
NCK1-211ENST00000491539 MT1LQ93083 61 aa4.95□□□□□ -1.62
NCK1-211ENST00000491539 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
NCK1-211ENST00000491539 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
NCK1-211ENST00000491539 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
NCK1-211ENST00000491539 TNP1P09430 55 aa4.92□□□□□ -1.62
NCK1-211ENST00000491539 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
NCK1-211ENST00000491539 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
NCK1-211ENST00000491539 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
NCK1-211ENST00000491539 TMEM258P61165 79 aa4.8□□□□□ -1.64
NCK1-211ENST00000491539 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
NCK1-211ENST00000491539 UQCR11O14957 56 aa4.77□□□□□ -1.65
NCK1-211ENST00000491539 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
NCK1-211ENST00000491539 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
NCK1-211ENST00000491539 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
NCK1-211ENST00000491539 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
NCK1-211ENST00000491539 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
NCK1-211ENST00000491539 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
NCK1-211ENST00000491539 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
NCK1-211ENST00000491539 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
NCK1-211ENST00000491539 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
NCK1-211ENST00000491539 K7ERS5 55 aa4.55□□□□□ -1.68
NCK1-211ENST00000491539 AHNAKQ09666 5890 aaKnown RBP4.55□□□□□ -1.68
NCK1-211ENST00000491539 PCP4P48539 62 aa4.54□□□□□ -1.68
NCK1-211ENST00000491539 V9GYY9 64 aa4.54□□□□□ -1.68
NCK1-211ENST00000491539 PSPHP1O15172 72 aa4.53□□□□□ -1.68
NCK1-211ENST00000491539 Q1T7F1 81 aa4.53□□□□□ -1.68
NCK1-211ENST00000491539 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
NCK1-211ENST00000491539 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
NCK1-211ENST00000491539 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
NCK1-211ENST00000491539 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
NCK1-211ENST00000491539 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
NCK1-211ENST00000491539 A6NED7 52 aa4.36□□□□□ -1.71
NCK1-211ENST00000491539 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
NCK1-211ENST00000491539 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
NCK1-211ENST00000491539 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
NCK1-211ENST00000491539 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
NCK1-211ENST00000491539 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
NCK1-211ENST00000491539 ROMO1P60602 79 aa4.26□□□□□ -1.73
NCK1-211ENST00000491539 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
NCK1-211ENST00000491539 MT1AP04731 61 aa4.21□□□□□ -1.74
NCK1-211ENST00000491539 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
NCK1-211ENST00000491539 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
NCK1-211ENST00000491539 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
NCK1-211ENST00000491539 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
NCK1-211ENST00000491539 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
NCK1-211ENST00000491539 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
NCK1-211ENST00000491539 MT3P25713 68 aa3.83□□□□□ -1.8
NCK1-211ENST00000491539 BRK1Q8WUW1 75 aa3.66□□□□□ -1.82
NCK1-211ENST00000491539 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
NCK1-211ENST00000491539 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
NCK1-211ENST00000491539 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
NCK1-211ENST00000491539 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
NCK1-211ENST00000491539 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
NCK1-211ENST00000491539 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
NCK1-211ENST00000491539 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
NCK1-211ENST00000491539 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
NCK1-211ENST00000491539 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
NCK1-211ENST00000491539 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
NCK1-211ENST00000491539 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
NCK1-211ENST00000491539 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
NCK1-211ENST00000491539 KTN1-AS1Q86SY8 53 aa3□□□□□ -1.93
NCK1-211ENST00000491539 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
NCK1-211ENST00000491539 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
NCK1-211ENST00000491539 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
NCK1-211ENST00000491539 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
NCK1-211ENST00000491539 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
NCK1-211ENST00000491539 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
NCK1-211ENST00000491539 PRM1P04553 51 aa2.17□□□□□ -2.06
NCK1-211ENST00000491539 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
NCK1-211ENST00000491539 INE1O15225 51 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms