RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ACYP2P14621 99 aa3.38□□□□□ -1.87
LSM2-213ENST00000491421 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
LSM2-213ENST00000491421 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
LSM2-213ENST00000491421 H7BZZ5 65 aa3.36□□□□□ -1.87
LSM2-213ENST00000491421 CHKB-CPT1BH3BT56 60 aa3.34□□□□□ -1.87
LSM2-213ENST00000491421 CYSTM1Q9H1C7 97 aa3.34□□□□□ -1.87
LSM2-213ENST00000491421 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
LSM2-213ENST00000491421 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
LSM2-213ENST00000491421 SPRR2DP22532 72 aa3.29□□□□□ -1.88
LSM2-213ENST00000491421 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
LSM2-213ENST00000491421 SNURFQ9Y675 71 aa3.29□□□□□ -1.88
LSM2-213ENST00000491421 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
LSM2-213ENST00000491421 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
LSM2-213ENST00000491421 KRTAP13-4Q3LI77 160 aa3.22□□□□□ -1.89
LSM2-213ENST00000491421 COA5Q86WW8 74 aa3.18□□□□□ -1.9
LSM2-213ENST00000491421 A8MU10 97 aa3.16□□□□□ -1.9
LSM2-213ENST00000491421 A0A0D9SG42 100 aa3.14□□□□□ -1.91
LSM2-213ENST00000491421 PRR15LQ9BU68 103 aa3.13□□□□□ -1.91
LSM2-213ENST00000491421 SPATA8Q6RVD6 105 aa3.11□□□□□ -1.91
LSM2-213ENST00000491421 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
LSM2-213ENST00000491421 MT1EP04732 61 aa3.08□□□□□ -1.92
LSM2-213ENST00000491421 LINC01558Q9Y6Z2 57 aa3.08□□□□□ -1.92
LSM2-213ENST00000491421 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
LSM2-213ENST00000491421 UQCR11O14957 56 aa3.06□□□□□ -1.92
LSM2-213ENST00000491421 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
LSM2-213ENST00000491421 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
LSM2-213ENST00000491421 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
LSM2-213ENST00000491421 A0A1B0GU69 56 aa3.02□□□□□ -1.93
LSM2-213ENST00000491421 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
LSM2-213ENST00000491421 MT3P25713 68 aa3.01□□□□□ -1.93
LSM2-213ENST00000491421 MT1GP13640 62 aa2.99□□□□□ -1.93
LSM2-213ENST00000491421 INE1O15225 51 aa2.98□□□□□ -1.93
LSM2-213ENST00000491421 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
LSM2-213ENST00000491421 MT1MQ8N339 61 aa2.94□□□□□ -1.94
LSM2-213ENST00000491421 MT1LQ93083 61 aa2.94□□□□□ -1.94
LSM2-213ENST00000491421 TNP1P09430 55 aa2.93□□□□□ -1.94
LSM2-213ENST00000491421 LCE3AQ5TA76 89 aa2.93□□□□□ -1.94
LSM2-213ENST00000491421 C10orf95Q9H7T3 257 aa2.92□□□□□ -1.94
LSM2-213ENST00000491421 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
LSM2-213ENST00000491421 MT4P47944 62 aa2.87□□□□□ -1.95
LSM2-213ENST00000491421 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
LSM2-213ENST00000491421 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
LSM2-213ENST00000491421 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
LSM2-213ENST00000491421 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
LSM2-213ENST00000491421 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
LSM2-213ENST00000491421 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
LSM2-213ENST00000491421 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
LSM2-213ENST00000491421 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
LSM2-213ENST00000491421 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
LSM2-213ENST00000491421 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
LSM2-213ENST00000491421 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
LSM2-213ENST00000491421 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
LSM2-213ENST00000491421 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
LSM2-213ENST00000491421 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
LSM2-213ENST00000491421 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
LSM2-213ENST00000491421 MT1AP04731 61 aa2.5□□□□□ -2.01
LSM2-213ENST00000491421 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
LSM2-213ENST00000491421 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
LSM2-213ENST00000491421 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
LSM2-213ENST00000491421 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
LSM2-213ENST00000491421 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
LSM2-213ENST00000491421 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
LSM2-213ENST00000491421 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
LSM2-213ENST00000491421 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
LSM2-213ENST00000491421 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
LSM2-213ENST00000491421 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
LSM2-213ENST00000491421 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
LSM2-213ENST00000491421 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
LSM2-213ENST00000491421 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
LSM2-213ENST00000491421 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
LSM2-213ENST00000491421 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
LSM2-213ENST00000491421 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
LSM2-213ENST00000491421 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
LSM2-213ENST00000491421 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
LSM2-213ENST00000491421 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
LSM2-213ENST00000491421 PRM1P04553 51 aa1.34□□□□□ -2.19
LSM2-213ENST00000491421 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
LSM2-213ENST00000491421 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 289.1 ms