RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
SRRM1-217ENST00000490543 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
SRRM1-217ENST00000490543 MT1LQ93083 61 aa3.15□□□□□ -1.91
SRRM1-217ENST00000490543 A0A0D9SG42 100 aa3.14□□□□□ -1.91
SRRM1-217ENST00000490543 KRTAP13-4Q3LI77 160 aa3.14□□□□□ -1.91
SRRM1-217ENST00000490543 ATP5EP2Q5VTU8 51 aa3.14□□□□□ -1.91
SRRM1-217ENST00000490543 F8W1H4 67 aa3.13□□□□□ -1.91
SRRM1-217ENST00000490543 COL5A1-AS1Q5SY13 56 aa3.12□□□□□ -1.91
SRRM1-217ENST00000490543 TRAV7A0A075B6U4 112 aa3.11□□□□□ -1.91
SRRM1-217ENST00000490543 V9GYY9 64 aa3.1□□□□□ -1.91
SRRM1-217ENST00000490543 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
SRRM1-217ENST00000490543 GTF2H5Q6ZYL4 71 aa3.09□□□□□ -1.91
SRRM1-217ENST00000490543 H3BPC8 53 aa3.07□□□□□ -1.92
SRRM1-217ENST00000490543 FAM240AA0A1B0GVK7 77 aa3.06□□□□□ -1.92
SRRM1-217ENST00000490543 ACYP2P14621 99 aa3.06□□□□□ -1.92
SRRM1-217ENST00000490543 SPTSSBQ8NFR3 76 aa3.05□□□□□ -1.92
SRRM1-217ENST00000490543 LINC00643Q86TS7 51 aa3.03□□□□□ -1.92
SRRM1-217ENST00000490543 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
SRRM1-217ENST00000490543 LOC105371267A0A1B0GV96 52 aa3.01□□□□□ -1.93
SRRM1-217ENST00000490543 SMIM26A0A096LP01 95 aa3□□□□□ -1.93
SRRM1-217ENST00000490543 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
SRRM1-217ENST00000490543 CHKB-CPT1BH3BT56 60 aa2.99□□□□□ -1.93
SRRM1-217ENST00000490543 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
SRRM1-217ENST00000490543 SPINT4Q6UDR6 99 aa2.95□□□□□ -1.94
SRRM1-217ENST00000490543 SCGB1A1P11684 91 aa2.94□□□□□ -1.94
SRRM1-217ENST00000490543 PSPHP1O15172 72 aa2.93□□□□□ -1.94
SRRM1-217ENST00000490543 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
SRRM1-217ENST00000490543 SPATA8Q6RVD6 105 aa2.92□□□□□ -1.94
SRRM1-217ENST00000490543 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
SRRM1-217ENST00000490543 PRO0628Q9UI54 55 aa2.87□□□□□ -1.95
SRRM1-217ENST00000490543 KRTAP12-3P60328 96 aa2.84□□□□□ -1.95
SRRM1-217ENST00000490543 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
SRRM1-217ENST00000490543 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
SRRM1-217ENST00000490543 TNP1P09430 55 aa2.83□□□□□ -1.96
SRRM1-217ENST00000490543 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
SRRM1-217ENST00000490543 A0A1B0GU33 70 aa2.81□□□□□ -1.96
SRRM1-217ENST00000490543 SNURFQ9Y675 71 aa2.81□□□□□ -1.96
SRRM1-217ENST00000490543 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
SRRM1-217ENST00000490543 SERP1Q9Y6X1 66 aa2.8□□□□□ -1.96
SRRM1-217ENST00000490543 SPANXA2-OT1Q8N9U9 137 aa2.78□□□□□ -1.96
SRRM1-217ENST00000490543 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
SRRM1-217ENST00000490543 COA5Q86WW8 74 aa2.75□□□□□ -1.97
SRRM1-217ENST00000490543 ANAPC13Q9BS18 74 aa2.74□□□□□ -1.97
SRRM1-217ENST00000490543 SMIM20Q8N5G0 67 aa2.73□□□□□ -1.97
SRRM1-217ENST00000490543 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
SRRM1-217ENST00000490543 J3QR89 54 aa2.67□□□□□ -1.98
SRRM1-217ENST00000490543 MT1AP04731 61 aa2.66□□□□□ -1.98
SRRM1-217ENST00000490543 A0A1B0GV90 55 aa2.65□□□□□ -1.99
SRRM1-217ENST00000490543 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SRRM1-217ENST00000490543 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
SRRM1-217ENST00000490543 K7ERS5 55 aa2.61□□□□□ -1.99
SRRM1-217ENST00000490543 SERP2Q8N6R1 65 aa2.6□□□□□ -1.99
SRRM1-217ENST00000490543 A0A1B0GU69 56 aa2.59□□□□□ -1.99
SRRM1-217ENST00000490543 KRTAP25-1Q3LHN0 102 aa2.55□□□□□ -2
SRRM1-217ENST00000490543 A6NED7 52 aa2.54□□□□□ -2
SRRM1-217ENST00000490543 H7BZZ5 65 aa2.46□□□□□ -2.02
SRRM1-217ENST00000490543 K7ERU9 68 aa2.43□□□□□ -2.02
SRRM1-217ENST00000490543 PMAIP1Q13794 54 aa2.43□□□□□ -2.02
SRRM1-217ENST00000490543 COX7CP15954 63 aa2.39□□□□□ -2.03
SRRM1-217ENST00000490543 PRR15LQ9BU68 103 aa2.39□□□□□ -2.03
SRRM1-217ENST00000490543 LINC01558Q9Y6Z2 57 aa2.33□□□□□ -2.04
SRRM1-217ENST00000490543 UQCR11O14957 56 aa2.32□□□□□ -2.04
SRRM1-217ENST00000490543 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SRRM1-217ENST00000490543 MIR22HGQ0VDD5 57 aa2.25□□□□□ -2.05
SRRM1-217ENST00000490543 RPS28P62857 69 aaKnown RBP2.18□□□□□ -2.06
SRRM1-217ENST00000490543 CCDC179H3BU77 68 aa2.14□□□□□ -2.07
SRRM1-217ENST00000490543 TMEM258P61165 79 aa2.14□□□□□ -2.07
SRRM1-217ENST00000490543 ATP5EP56381 51 aaPredicted RBP2.13□□□□□ -2.07
SRRM1-217ENST00000490543 KTN1-AS1Q86SY8 53 aa2.13□□□□□ -2.07
SRRM1-217ENST00000490543 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
SRRM1-217ENST00000490543 Q1T7F1 81 aa2.08□□□□□ -2.08
SRRM1-217ENST00000490543 ROMO1P60602 79 aa2.05□□□□□ -2.08
SRRM1-217ENST00000490543 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
SRRM1-217ENST00000490543 BRK1Q8WUW1 75 aa1.8□□□□□ -2.12
SRRM1-217ENST00000490543 INE1O15225 51 aa1.68□□□□□ -2.14
SRRM1-217ENST00000490543 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
SRRM1-217ENST00000490543 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
SRRM1-217ENST00000490543 PRM1P04553 51 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 64.2 ms