RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 AHNAK2Q8IVF2 5795 aa6.66□□□□□ -1.34
TNFRSF1B-202ENST00000489921 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
TNFRSF1B-202ENST00000489921 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
TNFRSF1B-202ENST00000489921 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
TNFRSF1B-202ENST00000489921 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
TNFRSF1B-202ENST00000489921 ANAPC13Q9BS18 74 aa6.49□□□□□ -1.37
TNFRSF1B-202ENST00000489921 CCDC179H3BU77 68 aa6.45□□□□□ -1.38
TNFRSF1B-202ENST00000489921 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
TNFRSF1B-202ENST00000489921 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
TNFRSF1B-202ENST00000489921 KRTAP5-5Q701N2 237 aaPredicted RBP6.41□□□□□ -1.38
TNFRSF1B-202ENST00000489921 ATP5EP56381 51 aaPredicted RBP6.35□□□□□ -1.39
TNFRSF1B-202ENST00000489921 KRTAP20-2Q3LI61 65 aa6.35□□□□□ -1.39
TNFRSF1B-202ENST00000489921 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
TNFRSF1B-202ENST00000489921 KRTAP5-7Q6L8G8 165 aa6.31□□□□□ -1.4
TNFRSF1B-202ENST00000489921 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
TNFRSF1B-202ENST00000489921 UQCR11O14957 56 aa6.27□□□□□ -1.41
TNFRSF1B-202ENST00000489921 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
TNFRSF1B-202ENST00000489921 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
TNFRSF1B-202ENST00000489921 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
TNFRSF1B-202ENST00000489921 KRTAP12-4P60329 112 aa6.19□□□□□ -1.42
TNFRSF1B-202ENST00000489921 TMEM258P61165 79 aa6.12□□□□□ -1.43
TNFRSF1B-202ENST00000489921 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
TNFRSF1B-202ENST00000489921 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
TNFRSF1B-202ENST00000489921 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
TNFRSF1B-202ENST00000489921 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
TNFRSF1B-202ENST00000489921 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
TNFRSF1B-202ENST00000489921 K7ERS5 55 aa5.96□□□□□ -1.46
TNFRSF1B-202ENST00000489921 PSPHP1O15172 72 aa5.9□□□□□ -1.46
TNFRSF1B-202ENST00000489921 KRTAP5-2Q701N4 177 aa5.88□□□□□ -1.47
TNFRSF1B-202ENST00000489921 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
TNFRSF1B-202ENST00000489921 MT1AP04731 61 aa5.85□□□□□ -1.47
TNFRSF1B-202ENST00000489921 Q1T7F1 81 aa5.84□□□□□ -1.47
TNFRSF1B-202ENST00000489921 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
TNFRSF1B-202ENST00000489921 V9GYY9 64 aa5.81□□□□□ -1.48
TNFRSF1B-202ENST00000489921 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
TNFRSF1B-202ENST00000489921 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
TNFRSF1B-202ENST00000489921 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
TNFRSF1B-202ENST00000489921 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
TNFRSF1B-202ENST00000489921 A6NED7 52 aa5.63□□□□□ -1.51
TNFRSF1B-202ENST00000489921 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
TNFRSF1B-202ENST00000489921 ROMO1P60602 79 aa5.59□□□□□ -1.51
TNFRSF1B-202ENST00000489921 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
TNFRSF1B-202ENST00000489921 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
TNFRSF1B-202ENST00000489921 MUC5BQ9HC84 5762 aaPredicted RBP5.53□□□□□ -1.52
TNFRSF1B-202ENST00000489921 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
TNFRSF1B-202ENST00000489921 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
TNFRSF1B-202ENST00000489921 MT3P25713 68 aa5.34□□□□□ -1.55
TNFRSF1B-202ENST00000489921 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
TNFRSF1B-202ENST00000489921 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
TNFRSF1B-202ENST00000489921 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
TNFRSF1B-202ENST00000489921 PCP4P48539 62 aa4.93□□□□□ -1.62
TNFRSF1B-202ENST00000489921 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
TNFRSF1B-202ENST00000489921 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
TNFRSF1B-202ENST00000489921 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
TNFRSF1B-202ENST00000489921 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
TNFRSF1B-202ENST00000489921 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
TNFRSF1B-202ENST00000489921 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
TNFRSF1B-202ENST00000489921 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
TNFRSF1B-202ENST00000489921 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
TNFRSF1B-202ENST00000489921 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
TNFRSF1B-202ENST00000489921 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
TNFRSF1B-202ENST00000489921 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
TNFRSF1B-202ENST00000489921 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
TNFRSF1B-202ENST00000489921 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
TNFRSF1B-202ENST00000489921 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
TNFRSF1B-202ENST00000489921 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
TNFRSF1B-202ENST00000489921 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
TNFRSF1B-202ENST00000489921 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
TNFRSF1B-202ENST00000489921 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
TNFRSF1B-202ENST00000489921 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
TNFRSF1B-202ENST00000489921 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
TNFRSF1B-202ENST00000489921 H3BS24 57 aa3.26□□□□□ -1.89
TNFRSF1B-202ENST00000489921 PRM1P04553 51 aa2.86□□□□□ -1.95
TNFRSF1B-202ENST00000489921 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
TNFRSF1B-202ENST00000489921 NDUFAF8A1L188 74 aa2.53□□□□□ -2
TNFRSF1B-202ENST00000489921 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
TNFRSF1B-202ENST00000489921 INE1O15225 51 aa1.93□□□□□ -2.1
TNFRSF1B-202ENST00000489921 A0A0A0MQY5 61 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 65.5 ms