RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 KRTAP13-4Q3LI77 160 aa3.38□□□□□ -1.87
SMG5-205ENST00000489907 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
SMG5-205ENST00000489907 M0QZ58 72 aa3.35□□□□□ -1.87
SMG5-205ENST00000489907 SPRR2DP22532 72 aa3.35□□□□□ -1.87
SMG5-205ENST00000489907 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
SMG5-205ENST00000489907 PRO2289Q9P1D8 64 aa3.34□□□□□ -1.87
SMG5-205ENST00000489907 MT3P25713 68 aa3.32□□□□□ -1.88
SMG5-205ENST00000489907 R4GN34 69 aa3.32□□□□□ -1.88
SMG5-205ENST00000489907 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
SMG5-205ENST00000489907 ROMO1P60602 79 aa3.28□□□□□ -1.88
SMG5-205ENST00000489907 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
SMG5-205ENST00000489907 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
SMG5-205ENST00000489907 LINC01554Q52M75 96 aa3.27□□□□□ -1.89
SMG5-205ENST00000489907 A0A0D9SG42 100 aa3.25□□□□□ -1.89
SMG5-205ENST00000489907 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
SMG5-205ENST00000489907 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
SMG5-205ENST00000489907 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
SMG5-205ENST00000489907 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
SMG5-205ENST00000489907 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.91
SMG5-205ENST00000489907 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
SMG5-205ENST00000489907 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
SMG5-205ENST00000489907 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
SMG5-205ENST00000489907 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
SMG5-205ENST00000489907 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
SMG5-205ENST00000489907 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
SMG5-205ENST00000489907 MT1EP04732 61 aa3.05□□□□□ -1.92
SMG5-205ENST00000489907 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
SMG5-205ENST00000489907 KRTAP4-7Q9BYR0 210 aa2.99□□□□□ -1.93
SMG5-205ENST00000489907 MT1GP13640 62 aa2.97□□□□□ -1.93
SMG5-205ENST00000489907 MT4P47944 62 aa2.96□□□□□ -1.94
SMG5-205ENST00000489907 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
SMG5-205ENST00000489907 TNP1P09430 55 aa2.95□□□□□ -1.94
SMG5-205ENST00000489907 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
SMG5-205ENST00000489907 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
SMG5-205ENST00000489907 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
SMG5-205ENST00000489907 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
SMG5-205ENST00000489907 MT1MQ8N339 61 aa2.92□□□□□ -1.94
SMG5-205ENST00000489907 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
SMG5-205ENST00000489907 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
SMG5-205ENST00000489907 MT1LQ93083 61 aa2.88□□□□□ -1.95
SMG5-205ENST00000489907 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
SMG5-205ENST00000489907 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
SMG5-205ENST00000489907 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
SMG5-205ENST00000489907 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
SMG5-205ENST00000489907 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
SMG5-205ENST00000489907 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
SMG5-205ENST00000489907 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
SMG5-205ENST00000489907 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
SMG5-205ENST00000489907 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
SMG5-205ENST00000489907 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
SMG5-205ENST00000489907 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
SMG5-205ENST00000489907 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
SMG5-205ENST00000489907 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
SMG5-205ENST00000489907 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
SMG5-205ENST00000489907 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SMG5-205ENST00000489907 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
SMG5-205ENST00000489907 MT1AP04731 61 aa2.44□□□□□ -2.02
SMG5-205ENST00000489907 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
SMG5-205ENST00000489907 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
SMG5-205ENST00000489907 INE1O15225 51 aa2.39□□□□□ -2.03
SMG5-205ENST00000489907 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
SMG5-205ENST00000489907 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
SMG5-205ENST00000489907 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
SMG5-205ENST00000489907 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
SMG5-205ENST00000489907 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
SMG5-205ENST00000489907 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
SMG5-205ENST00000489907 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
SMG5-205ENST00000489907 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
SMG5-205ENST00000489907 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
SMG5-205ENST00000489907 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
SMG5-205ENST00000489907 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
SMG5-205ENST00000489907 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
SMG5-205ENST00000489907 PRM1P04553 51 aa1.68□□□□□ -2.14
SMG5-205ENST00000489907 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
SMG5-205ENST00000489907 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
SMG5-205ENST00000489907 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
SMG5-205ENST00000489907 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
SMG5-205ENST00000489907 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 89.3 ms