RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 CYSTM1Q9H1C7 97 aa3.48□□□□□ -1.85
CCT3-213ENST00000489870 SMIM26A0A096LP01 95 aa3.47□□□□□ -1.85
CCT3-213ENST00000489870 SPINT4Q6UDR6 99 aa3.46□□□□□ -1.86
CCT3-213ENST00000489870 COX7CP15954 63 aa3.45□□□□□ -1.86
CCT3-213ENST00000489870 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
CCT3-213ENST00000489870 SPATA8Q6RVD6 105 aa3.44□□□□□ -1.86
CCT3-213ENST00000489870 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
CCT3-213ENST00000489870 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
CCT3-213ENST00000489870 A0A1B0GU69 56 aa3.4□□□□□ -1.87
CCT3-213ENST00000489870 H7BZZ5 65 aa3.4□□□□□ -1.87
CCT3-213ENST00000489870 TNP1P09430 55 aa3.39□□□□□ -1.87
CCT3-213ENST00000489870 MT1MQ8N339 61 aa3.38□□□□□ -1.87
CCT3-213ENST00000489870 MT1LQ93083 61 aa3.37□□□□□ -1.87
CCT3-213ENST00000489870 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
CCT3-213ENST00000489870 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
CCT3-213ENST00000489870 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
CCT3-213ENST00000489870 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
CCT3-213ENST00000489870 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
CCT3-213ENST00000489870 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
CCT3-213ENST00000489870 MT4P47944 62 aa3.28□□□□□ -1.88
CCT3-213ENST00000489870 ATP5EP56381 51 aaPredicted RBP3.28□□□□□ -1.88
CCT3-213ENST00000489870 A8MU10 97 aa3.27□□□□□ -1.89
CCT3-213ENST00000489870 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
CCT3-213ENST00000489870 ANAPC13Q9BS18 74 aa3.23□□□□□ -1.89
CCT3-213ENST00000489870 LINC01558Q9Y6Z2 57 aa3.23□□□□□ -1.89
CCT3-213ENST00000489870 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CCT3-213ENST00000489870 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
CCT3-213ENST00000489870 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
CCT3-213ENST00000489870 UQCR11O14957 56 aa3.21□□□□□ -1.9
CCT3-213ENST00000489870 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
CCT3-213ENST00000489870 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
CCT3-213ENST00000489870 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
CCT3-213ENST00000489870 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
CCT3-213ENST00000489870 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
CCT3-213ENST00000489870 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
CCT3-213ENST00000489870 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
CCT3-213ENST00000489870 K7ERS5 55 aa3.12□□□□□ -1.91
CCT3-213ENST00000489870 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
CCT3-213ENST00000489870 CCDC179H3BU77 68 aa3.1□□□□□ -1.91
CCT3-213ENST00000489870 TMEM258P61165 79 aa3.09□□□□□ -1.91
CCT3-213ENST00000489870 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
CCT3-213ENST00000489870 V9GYY9 64 aa3.05□□□□□ -1.92
CCT3-213ENST00000489870 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
CCT3-213ENST00000489870 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
CCT3-213ENST00000489870 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
CCT3-213ENST00000489870 PRAC1Q96KF2 57 aa3□□□□□ -1.93
CCT3-213ENST00000489870 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
CCT3-213ENST00000489870 Q1T7F1 81 aa2.96□□□□□ -1.94
CCT3-213ENST00000489870 MT1AP04731 61 aa2.9□□□□□ -1.95
CCT3-213ENST00000489870 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
CCT3-213ENST00000489870 CDC42SE1Q9NRR8 79 aa2.88□□□□□ -1.95
CCT3-213ENST00000489870 PSPHP1O15172 72 aa2.87□□□□□ -1.95
CCT3-213ENST00000489870 RPS28P62857 69 aaKnown RBP2.86□□□□□ -1.95
CCT3-213ENST00000489870 ROMO1P60602 79 aa2.82□□□□□ -1.96
CCT3-213ENST00000489870 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
CCT3-213ENST00000489870 A6NED7 52 aa2.81□□□□□ -1.96
CCT3-213ENST00000489870 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
CCT3-213ENST00000489870 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
CCT3-213ENST00000489870 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
CCT3-213ENST00000489870 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
CCT3-213ENST00000489870 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
CCT3-213ENST00000489870 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
CCT3-213ENST00000489870 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
CCT3-213ENST00000489870 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
CCT3-213ENST00000489870 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
CCT3-213ENST00000489870 PRO0628Q9UI54 55 aa2.33□□□□□ -2.04
CCT3-213ENST00000489870 BRK1Q8WUW1 75 aa2.25□□□□□ -2.05
CCT3-213ENST00000489870 PMAIP1Q13794 54 aa2.24□□□□□ -2.05
CCT3-213ENST00000489870 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
CCT3-213ENST00000489870 LUZP6Q538Z0 58 aa2.06□□□□□ -2.08
CCT3-213ENST00000489870 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
CCT3-213ENST00000489870 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
CCT3-213ENST00000489870 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
CCT3-213ENST00000489870 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
CCT3-213ENST00000489870 INE1O15225 51 aa1.51□□□□□ -2.17
CCT3-213ENST00000489870 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
CCT3-213ENST00000489870 PRM1P04553 51 aa1.36□□□□□ -2.19
CCT3-213ENST00000489870 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 331 ms