RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 MT1LQ93083 61 aa8.53□□□□□ -1.04
PTPN18-213ENST00000489215 Q1T7F1 81 aa8.52□□□□□ -1.05
PTPN18-213ENST00000489215 MT1MQ8N339 61 aa8.48□□□□□ -1.05
PTPN18-213ENST00000489215 PSPHP1O15172 72 aa8.45□□□□□ -1.06
PTPN18-213ENST00000489215 KRTAP25-1Q3LHN0 102 aa8.42□□□□□ -1.06
PTPN18-213ENST00000489215 KRTAP12-3P60328 96 aa8.38□□□□□ -1.07
PTPN18-213ENST00000489215 KRTAP4-9Q9BYQ8 210 aa8.25□□□□□ -1.09
PTPN18-213ENST00000489215 A6NED7 52 aa8.24□□□□□ -1.09
PTPN18-213ENST00000489215 LCE4AQ5TA78 99 aa8.23□□□□□ -1.09
PTPN18-213ENST00000489215 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
PTPN18-213ENST00000489215 KRTAP4-3Q9BYR4 195 aa8.18□□□□□ -1.1
PTPN18-213ENST00000489215 KRTAP23-1A1A580 65 aa8.16□□□□□ -1.1
PTPN18-213ENST00000489215 KRTAP19-4Q3LI73 84 aa8.11□□□□□ -1.11
PTPN18-213ENST00000489215 LCE1DQ5T752 114 aa8.11□□□□□ -1.11
PTPN18-213ENST00000489215 PCP4P48539 62 aa8.05□□□□□ -1.12
PTPN18-213ENST00000489215 CDC42SE1Q9NRR8 79 aa8.05□□□□□ -1.12
PTPN18-213ENST00000489215 KRTAP5-4Q6L8H1 288 aa8.04□□□□□ -1.12
PTPN18-213ENST00000489215 KRTAP4-7Q9BYR0 210 aa8.04□□□□□ -1.12
PTPN18-213ENST00000489215 MT4P47944 62 aa8.03□□□□□ -1.12
PTPN18-213ENST00000489215 ROMO1P60602 79 aa7.89□□□□□ -1.15
PTPN18-213ENST00000489215 KRTAP15-1Q3LI76 137 aa7.88□□□□□ -1.15
PTPN18-213ENST00000489215 HMCN1Q96RW7 5635 aa7.82□□□□□ -1.16
PTPN18-213ENST00000489215 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
PTPN18-213ENST00000489215 KRTAP5-5Q701N2 237 aaPredicted RBP7.76□□□□□ -1.17
PTPN18-213ENST00000489215 LCE3CQ5T5A8 94 aa7.73□□□□□ -1.17
PTPN18-213ENST00000489215 GPR98Q8WXG9 6306 aa7.71□□□□□ -1.18
PTPN18-213ENST00000489215 KRTAP12-4P60329 112 aa7.64□□□□□ -1.19
PTPN18-213ENST00000489215 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
PTPN18-213ENST00000489215 SPRR5A0A1B0GTR4 108 aa7.62□□□□□ -1.19
PTPN18-213ENST00000489215 KRTAP20-2Q3LI61 65 aa7.57□□□□□ -1.2
PTPN18-213ENST00000489215 KRTAP5-10Q6L8G5 202 aa7.47□□□□□ -1.21
PTPN18-213ENST00000489215 AHNAK2Q8IVF2 5795 aa7.42□□□□□ -1.22
PTPN18-213ENST00000489215 KRTAP5-3Q6L8H2 238 aa7.35□□□□□ -1.23
PTPN18-213ENST00000489215 SYNE1Q8NF91 8797 aaKnown RBP7.33□□□□□ -1.24
PTPN18-213ENST00000489215 MT1AP04731 61 aa7.29□□□□□ -1.24
PTPN18-213ENST00000489215 KRTAP5-7Q6L8G8 165 aa7.2□□□□□ -1.26
PTPN18-213ENST00000489215 KRTAP6-1Q3LI64 71 aa7.19□□□□□ -1.26
PTPN18-213ENST00000489215 KRTAP9-6A8MVA2 160 aa7.17□□□□□ -1.26
PTPN18-213ENST00000489215 BRK1Q8WUW1 75 aa7.14□□□□□ -1.27
PTPN18-213ENST00000489215 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
PTPN18-213ENST00000489215 KRTAP5-2Q701N4 177 aa7.05□□□□□ -1.28
PTPN18-213ENST00000489215 KRTAP4-11Q9BYQ6 195 aa6.9□□□□□ -1.3
PTPN18-213ENST00000489215 KRTAP6-2Q3LI66 62 aa6.86□□□□□ -1.31
PTPN18-213ENST00000489215 PMAIP1Q13794 54 aa6.76□□□□□ -1.33
PTPN18-213ENST00000489215 MT3P25713 68 aa6.72□□□□□ -1.33
PTPN18-213ENST00000489215 KRTAP5-8O75690 187 aa6.64□□□□□ -1.35
PTPN18-213ENST00000489215 OBSCNQ5VST9 7968 aa6.53□□□□□ -1.36
PTPN18-213ENST00000489215 PRAC1Q96KF2 57 aa6.36□□□□□ -1.39
PTPN18-213ENST00000489215 KRTAP9-9Q9BYP9 154 aa6.35□□□□□ -1.39
PTPN18-213ENST00000489215 KRTAP5-1Q6L8H4 278 aa6.29□□□□□ -1.4
PTPN18-213ENST00000489215 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
PTPN18-213ENST00000489215 LCE1EQ5T753 118 aa6.16□□□□□ -1.42
PTPN18-213ENST00000489215 MUC5ACP98088 5654 aa6.12□□□□□ -1.43
PTPN18-213ENST00000489215 MUC5BQ9HC84 5762 aaPredicted RBP6.1□□□□□ -1.43
PTPN18-213ENST00000489215 AHNAKQ09666 5890 aaKnown RBP6.01□□□□□ -1.45
PTPN18-213ENST00000489215 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
PTPN18-213ENST00000489215 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
PTPN18-213ENST00000489215 LCE1BQ5T7P3 118 aa5.71□□□□□ -1.5
PTPN18-213ENST00000489215 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
PTPN18-213ENST00000489215 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
PTPN18-213ENST00000489215 LCE3DQ9BYE3 92 aa5.62□□□□□ -1.51
PTPN18-213ENST00000489215 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
PTPN18-213ENST00000489215 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
PTPN18-213ENST00000489215 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.2□□□□□ -1.58
PTPN18-213ENST00000489215 KRTAP5-11Q6L8G4 156 aa5.13□□□□□ -1.59
PTPN18-213ENST00000489215 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
PTPN18-213ENST00000489215 LCE1FQ5T754 118 aa5.04□□□□□ -1.6
PTPN18-213ENST00000489215 KRTAP21-2Q3LI59 83 aa4.74□□□□□ -1.65
PTPN18-213ENST00000489215 PHGR1C9JFL3 82 aa4.42□□□□□ -1.7
PTPN18-213ENST00000489215 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
PTPN18-213ENST00000489215 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
PTPN18-213ENST00000489215 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
PTPN18-213ENST00000489215 PRM1P04553 51 aa3.99□□□□□ -1.77
PTPN18-213ENST00000489215 INE1O15225 51 aa3.63□□□□□ -1.83
PTPN18-213ENST00000489215 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
PTPN18-213ENST00000489215 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
PTPN18-213ENST00000489215 MUC16Q8WXI7 14507 aa2.86□□□□□ -1.95
PTPN18-213ENST00000489215 H3BS24 57 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 94.1 ms