RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 CRIPTQ9P021 101 aa3.63□□□□□ -1.83
TRAPPC12-221ENST00000489032 ADM2Q7Z4H4 148 aa3.62□□□□□ -1.83
TRAPPC12-221ENST00000489032 KMT2DO14686 5537 aa3.62□□□□□ -1.83
TRAPPC12-221ENST00000489032 PMAIP1Q13794 54 aa3.59□□□□□ -1.83
TRAPPC12-221ENST00000489032 MDN1Q9NU22 5596 aa3.59□□□□□ -1.84
TRAPPC12-221ENST00000489032 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
TRAPPC12-221ENST00000489032 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
TRAPPC12-221ENST00000489032 SPRR2GQ9BYE4 73 aa3.57□□□□□ -1.84
TRAPPC12-221ENST00000489032 K7ERS5 55 aa3.56□□□□□ -1.84
TRAPPC12-221ENST00000489032 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
TRAPPC12-221ENST00000489032 M0QZ58 72 aa3.55□□□□□ -1.84
TRAPPC12-221ENST00000489032 P0C880 135 aa3.55□□□□□ -1.84
TRAPPC12-221ENST00000489032 R4GN34 69 aa3.54□□□□□ -1.84
TRAPPC12-221ENST00000489032 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
TRAPPC12-221ENST00000489032 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
TRAPPC12-221ENST00000489032 A6NN06 94 aa3.52□□□□□ -1.85
TRAPPC12-221ENST00000489032 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
TRAPPC12-221ENST00000489032 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
TRAPPC12-221ENST00000489032 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
TRAPPC12-221ENST00000489032 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
TRAPPC12-221ENST00000489032 A0A0D9SG42 100 aa3.47□□□□□ -1.85
TRAPPC12-221ENST00000489032 MT1BP07438 61 aa3.47□□□□□ -1.85
TRAPPC12-221ENST00000489032 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
TRAPPC12-221ENST00000489032 LINC01554Q52M75 96 aa3.46□□□□□ -1.86
TRAPPC12-221ENST00000489032 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
TRAPPC12-221ENST00000489032 PLAC4Q8WY50 150 aa3.46□□□□□ -1.86
TRAPPC12-221ENST00000489032 SPRR2EP22531 72 aa3.44□□□□□ -1.86
TRAPPC12-221ENST00000489032 SPRR2BP35325 72 aa3.44□□□□□ -1.86
TRAPPC12-221ENST00000489032 SPRR2AP35326 72 aa3.44□□□□□ -1.86
TRAPPC12-221ENST00000489032 SPINT4Q6UDR6 99 aa3.41□□□□□ -1.86
TRAPPC12-221ENST00000489032 KRTAP12-1P59990 96 aa3.39□□□□□ -1.87
TRAPPC12-221ENST00000489032 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
TRAPPC12-221ENST00000489032 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
TRAPPC12-221ENST00000489032 ROMO1P60602 79 aa3.37□□□□□ -1.87
TRAPPC12-221ENST00000489032 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC12-221ENST00000489032 SPRR2DP22532 72 aa3.33□□□□□ -1.88
TRAPPC12-221ENST00000489032 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
TRAPPC12-221ENST00000489032 MT1XP80297 61 aa3.3□□□□□ -1.88
TRAPPC12-221ENST00000489032 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
TRAPPC12-221ENST00000489032 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
TRAPPC12-221ENST00000489032 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
TRAPPC12-221ENST00000489032 KRTAP8-1Q8IUC2 63 aa3.22□□□□□ -1.89
TRAPPC12-221ENST00000489032 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
TRAPPC12-221ENST00000489032 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
TRAPPC12-221ENST00000489032 C10orf95Q9H7T3 257 aa3.19□□□□□ -1.9
TRAPPC12-221ENST00000489032 TNP1P09430 55 aa3.15□□□□□ -1.91
TRAPPC12-221ENST00000489032 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
TRAPPC12-221ENST00000489032 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
TRAPPC12-221ENST00000489032 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
TRAPPC12-221ENST00000489032 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
TRAPPC12-221ENST00000489032 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
TRAPPC12-221ENST00000489032 MT4P47944 62 aa2.95□□□□□ -1.94
TRAPPC12-221ENST00000489032 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
TRAPPC12-221ENST00000489032 KRTAP19-5Q3LI72 72 aa2.93□□□□□ -1.94
TRAPPC12-221ENST00000489032 MT1EP04732 61 aa2.92□□□□□ -1.94
TRAPPC12-221ENST00000489032 KRTAP19-3Q7Z4W3 81 aa2.88□□□□□ -1.95
TRAPPC12-221ENST00000489032 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
TRAPPC12-221ENST00000489032 MT1GP13640 62 aa2.84□□□□□ -1.95
TRAPPC12-221ENST00000489032 MT1LQ93083 61 aa2.82□□□□□ -1.96
TRAPPC12-221ENST00000489032 MT1MQ8N339 61 aa2.77□□□□□ -1.97
TRAPPC12-221ENST00000489032 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
TRAPPC12-221ENST00000489032 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
TRAPPC12-221ENST00000489032 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
TRAPPC12-221ENST00000489032 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
TRAPPC12-221ENST00000489032 MUC5ACP98088 5654 aa2.57□□□□□ -2
TRAPPC12-221ENST00000489032 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
TRAPPC12-221ENST00000489032 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
TRAPPC12-221ENST00000489032 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
TRAPPC12-221ENST00000489032 MT1AP04731 61 aa2.41□□□□□ -2.02
TRAPPC12-221ENST00000489032 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
TRAPPC12-221ENST00000489032 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
TRAPPC12-221ENST00000489032 INE1O15225 51 aa2.28□□□□□ -2.04
TRAPPC12-221ENST00000489032 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
TRAPPC12-221ENST00000489032 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
TRAPPC12-221ENST00000489032 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
TRAPPC12-221ENST00000489032 PRM1P04553 51 aa1.73□□□□□ -2.13
TRAPPC12-221ENST00000489032 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
TRAPPC12-221ENST00000489032 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms