RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 SPINT4Q6UDR6 99 aa4.11□□□□□ -1.75
VAMP7-206ENST00000488344 A0A1B0GU33 70 aa4.09□□□□□ -1.75
VAMP7-206ENST00000488344 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
VAMP7-206ENST00000488344 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
VAMP7-206ENST00000488344 KRTAP12-1P59990 96 aa4.04□□□□□ -1.76
VAMP7-206ENST00000488344 SMIM26A0A096LP01 95 aa4.02□□□□□ -1.77
VAMP7-206ENST00000488344 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
VAMP7-206ENST00000488344 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
VAMP7-206ENST00000488344 MT3P25713 68 aa3.99□□□□□ -1.77
VAMP7-206ENST00000488344 MT1MQ8N339 61 aa3.99□□□□□ -1.77
VAMP7-206ENST00000488344 MT1LQ93083 61 aa3.98□□□□□ -1.77
VAMP7-206ENST00000488344 A0A1B0GU69 56 aa3.97□□□□□ -1.77
VAMP7-206ENST00000488344 COX7CP15954 63 aa3.97□□□□□ -1.77
VAMP7-206ENST00000488344 TNP1P09430 55 aa3.96□□□□□ -1.78
VAMP7-206ENST00000488344 MT4P47944 62 aa3.96□□□□□ -1.78
VAMP7-206ENST00000488344 H7BZZ5 65 aa3.93□□□□□ -1.78
VAMP7-206ENST00000488344 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
VAMP7-206ENST00000488344 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
VAMP7-206ENST00000488344 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
VAMP7-206ENST00000488344 A8MU10 97 aa3.88□□□□□ -1.79
VAMP7-206ENST00000488344 PRR15LQ9BU68 103 aa3.85□□□□□ -1.79
VAMP7-206ENST00000488344 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
VAMP7-206ENST00000488344 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
VAMP7-206ENST00000488344 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
VAMP7-206ENST00000488344 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
VAMP7-206ENST00000488344 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
VAMP7-206ENST00000488344 ATP5EP56381 51 aaPredicted RBP3.76□□□□□ -1.81
VAMP7-206ENST00000488344 ANAPC13Q9BS18 74 aa3.76□□□□□ -1.81
VAMP7-206ENST00000488344 LINC01558Q9Y6Z2 57 aa3.71□□□□□ -1.82
VAMP7-206ENST00000488344 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
VAMP7-206ENST00000488344 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
VAMP7-206ENST00000488344 UQCR11O14957 56 aa3.69□□□□□ -1.82
VAMP7-206ENST00000488344 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
VAMP7-206ENST00000488344 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
VAMP7-206ENST00000488344 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
VAMP7-206ENST00000488344 CCDC179H3BU77 68 aa3.62□□□□□ -1.83
VAMP7-206ENST00000488344 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
VAMP7-206ENST00000488344 K7ERS5 55 aa3.61□□□□□ -1.83
VAMP7-206ENST00000488344 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
VAMP7-206ENST00000488344 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
VAMP7-206ENST00000488344 TMEM258P61165 79 aa3.56□□□□□ -1.84
VAMP7-206ENST00000488344 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
VAMP7-206ENST00000488344 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
VAMP7-206ENST00000488344 V9GYY9 64 aa3.45□□□□□ -1.86
VAMP7-206ENST00000488344 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
VAMP7-206ENST00000488344 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
VAMP7-206ENST00000488344 MT1AP04731 61 aa3.4□□□□□ -1.87
VAMP7-206ENST00000488344 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
VAMP7-206ENST00000488344 PSPHP1O15172 72 aa3.38□□□□□ -1.87
VAMP7-206ENST00000488344 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
VAMP7-206ENST00000488344 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
VAMP7-206ENST00000488344 Q1T7F1 81 aa3.35□□□□□ -1.87
VAMP7-206ENST00000488344 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
VAMP7-206ENST00000488344 PCP4P48539 62 aa3.33□□□□□ -1.88
VAMP7-206ENST00000488344 RPS28P62857 69 aaKnown RBP3.33□□□□□ -1.88
VAMP7-206ENST00000488344 A6NED7 52 aa3.3□□□□□ -1.88
VAMP7-206ENST00000488344 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
VAMP7-206ENST00000488344 ROMO1P60602 79 aa3.26□□□□□ -1.89
VAMP7-206ENST00000488344 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
VAMP7-206ENST00000488344 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
VAMP7-206ENST00000488344 SVIPQ8NHG7 77 aa3.01□□□□□ -1.93
VAMP7-206ENST00000488344 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
VAMP7-206ENST00000488344 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
VAMP7-206ENST00000488344 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
VAMP7-206ENST00000488344 PRAC1Q96KF2 57 aa2.77□□□□□ -1.97
VAMP7-206ENST00000488344 BRK1Q8WUW1 75 aa2.63□□□□□ -1.99
VAMP7-206ENST00000488344 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
VAMP7-206ENST00000488344 PMAIP1Q13794 54 aa2.46□□□□□ -2.02
VAMP7-206ENST00000488344 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
VAMP7-206ENST00000488344 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
VAMP7-206ENST00000488344 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
VAMP7-206ENST00000488344 LUZP6Q538Z0 58 aa2.15□□□□□ -2.07
VAMP7-206ENST00000488344 PRO0628Q9UI54 55 aa2.1□□□□□ -2.07
VAMP7-206ENST00000488344 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
VAMP7-206ENST00000488344 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
VAMP7-206ENST00000488344 PRM1P04553 51 aa1.63□□□□□ -2.15
VAMP7-206ENST00000488344 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
VAMP7-206ENST00000488344 INE1O15225 51 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 87.5 ms