RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 RELNP78509 3460 aa0.59□□□□□ -2.31
RBM28-207ENST00000488249 SMR3BP02814 79 aaPredicted RBP0.59□□□□□ -2.31
RBM28-207ENST00000488249 PKD1P98161 4303 aa0.59□□□□□ -2.32
RBM28-207ENST00000488249 DYNC2H1Q8NCM8 4307 aaKnown RBP0.59□□□□□ -2.32
RBM28-207ENST00000488249 ANK3Q12955 4377 aaKnown RBP0.58□□□□□ -2.32
RBM28-207ENST00000488249 SPRR2GQ9BYE4 73 aa0.58□□□□□ -2.32
RBM28-207ENST00000488249 DNAH1Q9P2D7 4330 aa0.58□□□□□ -2.32
RBM28-207ENST00000488249 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
RBM28-207ENST00000488249 DNAH6Q9C0G6 4158 aa0.57□□□□□ -2.32
RBM28-207ENST00000488249 RYR2Q92736 4967 aa0.57□□□□□ -2.32
RBM28-207ENST00000488249 CMYA5Q8N3K9 4069 aa0.57□□□□□ -2.32
RBM28-207ENST00000488249 CSMD2Q7Z408 3487 aa0.57□□□□□ -2.32
RBM28-207ENST00000488249 KMT2CQ8NEZ4 4911 aaKnown RBP0.57□□□□□ -2.32
RBM28-207ENST00000488249 VPS13CQ709C8 3753 aa0.57□□□□□ -2.32
RBM28-207ENST00000488249 SPRR2DP22532 72 aa0.57□□□□□ -2.32
RBM28-207ENST00000488249 PLECQ15149 4684 aaKnown RBP0.56□□□□□ -2.32
RBM28-207ENST00000488249 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
RBM28-207ENST00000488249 FAT3Q8TDW7 4589 aa0.56□□□□□ -2.32
RBM28-207ENST00000488249 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
RBM28-207ENST00000488249 DNAH5Q8TE73 4624 aa0.55□□□□□ -2.32
RBM28-207ENST00000488249 NEBP20929 6669 aa0.54□□□□□ -2.32
RBM28-207ENST00000488249 FSIP2Q5CZC0 6907 aa0.54□□□□□ -2.32
RBM28-207ENST00000488249 PKHD1P08F94 4074 aa0.54□□□□□ -2.32
RBM28-207ENST00000488249 MUC3AQ02505 3323 aa0.54□□□□□ -2.32
RBM28-207ENST00000488249 SPRR2BP35325 72 aa0.54□□□□□ -2.32
RBM28-207ENST00000488249 KRTAP20-1Q3LI63 56 aa0.54□□□□□ -2.32
RBM28-207ENST00000488249 LRP1Q07954 4544 aaKnown RBP0.54□□□□□ -2.32
RBM28-207ENST00000488249 DYNC1H1Q14204 4646 aaKnown RBP0.54□□□□□ -2.32
RBM28-207ENST00000488249 FLGP20930 4061 aaPredicted RBP0.53□□□□□ -2.32
RBM28-207ENST00000488249 MT1AP04731 61 aa0.53□□□□□ -2.32
RBM28-207ENST00000488249 MT1EP04732 61 aa0.53□□□□□ -2.32
RBM28-207ENST00000488249 KRTAP19-8Q3LI54 63 aa0.53□□□□□ -2.32
RBM28-207ENST00000488249 HYDINQ4G0P3 5121 aa0.52□□□□□ -2.33
RBM28-207ENST00000488249 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
RBM28-207ENST00000488249 EPPK1P58107 5090 aaKnown RBP0.52□□□□□ -2.33
RBM28-207ENST00000488249 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
RBM28-207ENST00000488249 KMT2DO14686 5537 aa0.52□□□□□ -2.33
RBM28-207ENST00000488249 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
RBM28-207ENST00000488249 LPAP08519 4548 aa0.51□□□□□ -2.33
RBM28-207ENST00000488249 RYR3Q15413 4870 aa0.51□□□□□ -2.33
RBM28-207ENST00000488249 RNF213Q63HN8 5207 aa0.51□□□□□ -2.33
RBM28-207ENST00000488249 ABCA13Q86UQ4 5058 aa0.51□□□□□ -2.33
RBM28-207ENST00000488249 MT1LQ93083 61 aa0.51□□□□□ -2.33
RBM28-207ENST00000488249 STARD9Q9P2P6 4700 aa0.51□□□□□ -2.33
RBM28-207ENST00000488249 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
RBM28-207ENST00000488249 MT1HL1P0DM35 61 aa0.5□□□□□ -2.33
RBM28-207ENST00000488249 KRTAP19-5Q3LI72 72 aa0.5□□□□□ -2.33
RBM28-207ENST00000488249 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
RBM28-207ENST00000488249 HERC1Q15751 4861 aa0.49□□□□□ -2.33
RBM28-207ENST00000488249 SPRR2AP35326 72 aa0.49□□□□□ -2.33
RBM28-207ENST00000488249 FAT1Q14517 4588 aa0.48□□□□□ -2.33
RBM28-207ENST00000488249 SSPOA2VEC9 5147 aa0.48□□□□□ -2.33
RBM28-207ENST00000488249 MT1HP80294 61 aa0.48□□□□□ -2.33
RBM28-207ENST00000488249 MT1XP80297 61 aa0.47□□□□□ -2.33
RBM28-207ENST00000488249 KRTAP19-2Q3LHN2 52 aa0.47□□□□□ -2.33
RBM28-207ENST00000488249 BIRC6Q9NR09 4857 aa0.47□□□□□ -2.33
RBM28-207ENST00000488249 MUC17Q685J3 4493 aa0.47□□□□□ -2.33
RBM28-207ENST00000488249 DNHD1Q96M86 4753 aa0.46□□□□□ -2.34
RBM28-207ENST00000488249 MT1GP13640 62 aa0.46□□□□□ -2.34
RBM28-207ENST00000488249 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
RBM28-207ENST00000488249 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
RBM28-207ENST00000488249 MT1FP04733 61 aa0.45□□□□□ -2.34
RBM28-207ENST00000488249 SPRR2FQ96RM1 72 aa0.45□□□□□ -2.34
RBM28-207ENST00000488249 MT2AP02795 61 aa0.44□□□□□ -2.34
RBM28-207ENST00000488249 MT1BP07438 61 aa0.44□□□□□ -2.34
RBM28-207ENST00000488249 SPRR2EP22531 72 aa0.44□□□□□ -2.34
RBM28-207ENST00000488249 LRP2P98164 4655 aa0.44□□□□□ -2.34
RBM28-207ENST00000488249 MT1MQ8N339 61 aa0.43□□□□□ -2.34
RBM28-207ENST00000488249 KRTAP19-7Q3SYF9 63 aa0.42□□□□□ -2.34
RBM28-207ENST00000488249 HMCN2Q8NDA2 5059 aa0.42□□□□□ -2.34
RBM28-207ENST00000488249 HERC2O95714 4834 aa0.4□□□□□ -2.35
RBM28-207ENST00000488249 USH2AO75445 5202 aa0.38□□□□□ -2.35
RBM28-207ENST00000488249 MUC12Q9UKN1 5478 aa0.35□□□□□ -2.35
RBM28-207ENST00000488249 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
RBM28-207ENST00000488249 KRTAP19-6Q3LI70 58 aa0.33□□□□□ -2.36
RBM28-207ENST00000488249 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
RBM28-207ENST00000488249 MT4P47944 62 aa0.21□□□□□ -2.38
RBM28-207ENST00000488249 KRTAP20-2Q3LI61 65 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 2145.1 ms